Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MAPK10-266ENST00000641066 6555 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AL391987.6-201ENST00000305671 199 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A2P08572 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
COL4A2P08572 RNU6-1180P-201ENST00000364935 107 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL4A2P08572 RNU6-224P-201ENST00000384055 107 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AL590084.1-201ENST00000407885 387 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AL161449.1-201ENST00000414531 1199 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.6□□□□□ -2.15
COL4A2P08572 HMGN2P30-201ENST00000423237 256 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A2P08572 AC005297.2-201ENST00000450430 606 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 RPL18AP17-201ENST00000455326 198 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 RPS15AP36-201ENST00000492022 382 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A2P08572 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A2P08572 RNA5SP364-201ENST00000516938 78 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A2P08572 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.6□□□□□ -2.15
COL4A2P08572 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.6□□□□□ -2.15
COL4A2P08572 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A2P08572 HIGD1AP17-201ENST00000554576 276 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.6□□□□□ -2.15
COL4A2P08572 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.6□□□□□ -2.15
COL4A2P08572 AC090615.1-201ENST00000577519 154 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A2P08572 BNIP3P26-201ENST00000600827 554 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AP001429.1-201ENST00000602568 530 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AL138478.1-201ENST00000612252 832 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC104763.3-201ENST00000613765 618 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC010975.3-201ENST00000618727 978 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A2P08572 AC110079.1-202ENST00000635213 138 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC009812.4-201ENST00000569134 1805 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC087359.1-201ENST00000508335 1740 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AL079343.1-201ENST00000572358 1771 ntBASIC1.59□□□□□ -2.15
COL4A2P08572 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
COL4A2P08572 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
COL4A2P08572 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
COL4A2P08572 RNU6-1257P-201ENST00000384625 110 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 Y_RNA.578-201ENST00000390903 88 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 MIR1290-201ENST00000408735 78 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.59□□□□□ -2.16
COL4A2P08572 CCDC58P2-201ENST00000417131 366 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 TIMM9P2-201ENST00000419324 266 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.59□□□□□ -2.16
COL4A2P08572 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.59□□□□□ -2.16
COL4A2P08572 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.59□□□□□ -2.16
COL4A2P08572 GTF2IP7-202ENST00000436677 309 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.59□□□□□ -2.16
COL4A2P08572 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.59□□□□□ -2.16
COL4A2P08572 AL049714.1-201ENST00000466686 347 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
COL4A2P08572 RNU6-583P-201ENST00000516012 92 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 MTND1P36-201ENST00000522384 936 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.59□□□□□ -2.16
COL4A2P08572 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.59□□□□□ -2.16
COL4A2P08572 AL132657.2-201ENST00000564417 358 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 AC091057.2-201ENST00000602594 792 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 AL606834.3-201ENST00000602615 496 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 AC021749.1-201ENST00000604322 607 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 AL133507.1-201ENST00000605269 557 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 AL158211.4-201ENST00000606988 584 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 MIR6895-201ENST00000613497 78 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 AC013437.2-201ENST00000639587 677 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 PABPC1P9-201ENST00000426076 1612 ntBASIC1.59□□□□□ -2.16
COL4A2P08572 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.58□□□□□ -2.16
COL4A2P08572 SNORA7.1-201ENST00000363750 139 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 RNU6-1078P-201ENST00000364522 103 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL4A2P08572 RPL21P1-201ENST00000399532 476 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 TXNP7-201ENST00000406296 293 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC096533.1-201ENST00000411645 353 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC019178.2-201ENST00000423595 505 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.58□□□□□ -2.16
COL4A2P08572 THAP5P1-201ENST00000439089 262 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 RPL26P6-201ENST00000440913 438 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 PIGFP3-201ENST00000441918 722 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A2P08572 AL137159.1-201ENST00000452808 512 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A2P08572 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A2P08572 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A2P08572 TMEM251P1-201ENST00000503717 318 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 RAC1P5-201ENST00000512182 576 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A2P08572 RNA5SP490-201ENST00000517141 136 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC084851.1-201ENST00000529105 249 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC087441.2-201ENST00000529141 262 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A2P08572 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A2P08572 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.58□□□□□ -2.16
COL4A2P08572 AC104072.1-201ENST00000568817 668 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AL022067.1-201ENST00000602426 454 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC004853.1-201ENST00000604902 698 ntBASIC1.58□□□□□ -2.16
COL4A2P08572 AC019159.1-201ENST00000605094 187 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms