Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 BNIP3P8-201ENST00000597863 560 ntBASIC2.39□□□□□ -2.03
RETP07949 AL158211.4-201ENST00000606988 584 ntBASIC2.39□□□□□ -2.03
RETP07949 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.39□□□□□ -2.03
RETP07949 MIR6840-201ENST00000611937 71 ntBASIC2.39□□□□□ -2.03
RETP07949 AC009159.2-201ENST00000617603 606 ntBASIC2.39□□□□□ -2.03
RETP07949 CU459211.1-201ENST00000635667 749 ntBASIC2.39□□□□□ -2.03
RETP07949 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
RETP07949 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.39□□□□□ -2.03
RETP07949 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
RETP07949 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
RETP07949 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RETP07949 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RETP07949 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RETP07949 RNU5A-1-201ENST00000362698 116 ntBASIC2.38□□□□□ -2.03
RETP07949 RNU6-1214P-201ENST00000363650 109 ntBASIC2.38□□□□□ -2.03
RETP07949 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
RETP07949 RNU6-777P-201ENST00000364265 104 ntBASIC2.38□□□□□ -2.03
RETP07949 Y_RNA.226-201ENST00000364337 114 ntBASIC2.38□□□□□ -2.03
RETP07949 AL162578.1-201ENST00000406202 378 ntBASIC2.38□□□□□ -2.03
RETP07949 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.38□□□□□ -2.03
RETP07949 AF274854.1-201ENST00000413236 615 ntBASIC2.38□□□□□ -2.03
RETP07949 MTND1P23-201ENST00000416931 372 ntBASIC2.38□□□□□ -2.03
RETP07949 AC010099.3-201ENST00000423896 409 ntBASIC2.38□□□□□ -2.03
RETP07949 RPL7L1P10-201ENST00000427790 463 ntBASIC2.38□□□□□ -2.03
RETP07949 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.38□□□□□ -2.03
RETP07949 IPO7P1-201ENST00000442031 636 ntBASIC2.38□□□□□ -2.03
RETP07949 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.38□□□□□ -2.03
RETP07949 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.38□□□□□ -2.03
RETP07949 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.38□□□□□ -2.03
RETP07949 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.38□□□□□ -2.03
RETP07949 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.38□□□□□ -2.03
RETP07949 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.38□□□□□ -2.03
RETP07949 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
RETP07949 AC132942.1-201ENST00000486753 483 ntBASIC2.38□□□□□ -2.03
RETP07949 TTC39CP1-201ENST00000512513 755 ntBASIC2.38□□□□□ -2.03
RETP07949 RNU6-928P-201ENST00000516876 104 ntBASIC2.38□□□□□ -2.03
RETP07949 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
RETP07949 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.38□□□□□ -2.03
RETP07949 CKS1BP7-201ENST00000522230 235 ntBASIC2.38□□□□□ -2.03
RETP07949 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.38□□□□□ -2.03
RETP07949 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.38□□□□□ -2.03
RETP07949 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.38□□□□□ -2.03
RETP07949 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.38□□□□□ -2.03
RETP07949 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.38□□□□□ -2.03
RETP07949 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.38□□□□□ -2.03
RETP07949 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.38□□□□□ -2.03
RETP07949 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.38□□□□□ -2.03
RETP07949 MIR1291-201ENST00000627649 87 ntBASIC2.38□□□□□ -2.03
RETP07949 MTND5P6-201ENST00000422338 1798 ntBASIC2.38□□□□□ -2.03
RETP07949 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RETP07949 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RETP07949 AC016717.2-201ENST00000609089 5141 ntBASIC2.37□□□□□ -2.03
RETP07949 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.37□□□□□ -2.03
RETP07949 AC010680.1-201ENST00000590024 3590 ntBASIC2.37□□□□□ -2.03
RETP07949 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.37□□□□□ -2.03
RETP07949 RNU6-270P-201ENST00000364131 105 ntBASIC2.37□□□□□ -2.03
RETP07949 RNU6-1207P-201ENST00000384343 107 ntBASIC2.37□□□□□ -2.03
RETP07949 RNU6-1072P-201ENST00000384703 107 ntBASIC2.37□□□□□ -2.03
RETP07949 RNU6-443P-201ENST00000384780 107 ntBASIC2.37□□□□□ -2.03
RETP07949 AC119751.3-201ENST00000399720 670 ntBASIC2.37□□□□□ -2.03
RETP07949 AL513331.1-201ENST00000411908 397 ntBASIC2.37□□□□□ -2.03
RETP07949 USP9YP33-201ENST00000412220 421 ntBASIC2.37□□□□□ -2.03
RETP07949 MTCYBP38-201ENST00000417160 1123 ntBASIC2.37□□□□□ -2.03
RETP07949 MORF4L1P6-201ENST00000418771 268 ntBASIC2.37□□□□□ -2.03
RETP07949 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.37□□□□□ -2.03
RETP07949 AL953862.1-201ENST00000423016 168 ntBASIC2.37□□□□□ -2.03
RETP07949 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.37□□□□□ -2.03
RETP07949 USP9YP35-201ENST00000435696 412 ntBASIC2.37□□□□□ -2.03
RETP07949 PGBD4P3-201ENST00000440731 581 ntBASIC2.37□□□□□ -2.03
RETP07949 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.37□□□□□ -2.03
RETP07949 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.37□□□□□ -2.03
RETP07949 snoU13.8-201ENST00000458890 104 ntBASIC2.37□□□□□ -2.03
RETP07949 MEMO1P3-201ENST00000459811 302 ntBASIC2.37□□□□□ -2.03
RETP07949 RPL30P5-201ENST00000494923 336 ntBASIC2.37□□□□□ -2.03
RETP07949 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RETP07949 SNORA3.4-201ENST00000515969 96 ntBASIC2.37□□□□□ -2.03
RETP07949 COX6CP5-201ENST00000527162 228 ntBASIC2.37□□□□□ -2.03
RETP07949 LRRC34P1-201ENST00000542742 915 ntBASIC2.37□□□□□ -2.03
RETP07949 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.37□□□□□ -2.03
RETP07949 TRAV28-201ENST00000557548 323 ntBASIC2.37□□□□□ -2.03
RETP07949 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.37□□□□□ -2.03
RETP07949 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RETP07949 RPS15AP11-201ENST00000594193 385 ntBASIC2.37□□□□□ -2.03
RETP07949 AP000942.3-201ENST00000603702 160 ntBASIC2.37□□□□□ -2.03
RETP07949 AL031281.1-201ENST00000604049 488 ntBASIC2.37□□□□□ -2.03
RETP07949 AC112220.3-201ENST00000605502 502 ntBASIC2.37□□□□□ -2.03
RETP07949 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.37□□□□□ -2.03
RETP07949 AC245884.12-201ENST00000615364 59 ntBASIC2.37□□□□□ -2.03
RETP07949 AL445264.1-201ENST00000621719 171 ntBASIC2.37□□□□□ -2.03
RETP07949 AP002791.1-201ENST00000623291 381 ntBASIC2.37□□□□□ -2.03
RETP07949 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RETP07949 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RETP07949 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.37□□□□□ -2.03
RETP07949 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RETP07949 AC009902.3-201ENST00000606235 2172 ntBASIC2.36□□□□□ -2.03
RETP07949 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.36□□□□□ -2.03
RETP07949 Y_RNA.140-201ENST00000363474 103 ntBASIC2.36□□□□□ -2.03
RETP07949 SNORA38-201ENST00000363946 132 ntBASIC2.36□□□□□ -2.03
RETP07949 RNU6-461P-201ENST00000364195 107 ntBASIC2.36□□□□□ -2.03
RETP07949 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms