Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SNORD121B-201ENST00000458838 81 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AC069528.1-202ENST00000482888 637 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 LTV1P1-201ENST00000510683 1237 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 RNA5SP291-201ENST00000517222 105 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 CBX3P4-201ENST00000538909 354 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DQB2P05538 AC098483.2-201ENST00000603158 454 ntBASIC1.68□□□□□ -2.14
HLA-DQB2P05538 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 RNU5B-1-201ENST00000363286 116 ntBASIC1.67□□□□□ -2.14
HLA-DQB2P05538 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 MTCO2P5-201ENST00000422621 426 ntBASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 DPRXP1-201ENST00000426312 460 ntBASIC1.67□□□□□ -2.14
HLA-DQB2P05538 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AL096829.2-201ENST00000446582 742 ntBASIC1.67□□□□□ -2.14
HLA-DQB2P05538 SNORA25.15-201ENST00000516487 89 ntBASIC1.67□□□□□ -2.14
HLA-DQB2P05538 RNU6-362P-201ENST00000516736 90 ntBASIC1.67□□□□□ -2.14
HLA-DQB2P05538 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
HLA-DQB2P05538 MIR3199-1-201ENST00000582434 88 ntBASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AL021997.1-201ENST00000605757 193 ntBASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AL161423.1-201ENST00000613700 262 ntBASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AC020658.4-201ENST00000613987 684 ntBASIC1.67□□□□□ -2.14
HLA-DQB2P05538 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.67□□□□□ -2.14
HLA-DQB2P05538 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AC002543.1-201ENST00000299783 1954 ntBASIC1.67□□□□□ -2.14
HLA-DQB2P05538 AL356473.1-201ENST00000406203 1408 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AC010889.1-201ENST00000566193 2666 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 UBE2L2-201ENST00000254302 429 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 Y_RNA.234-201ENST00000364409 97 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 RNA5SP125-201ENST00000364843 120 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 RNU6-468P-201ENST00000384003 109 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 MIR676-201ENST00000390702 67 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AC092634.2-201ENST00000428146 1010 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 MED14P1-201ENST00000430517 648 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 SEPT7P5-201ENST00000434048 306 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 SSXP1-201ENST00000453640 473 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AC068781.1-201ENST00000488231 618 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 RPS27AP10-201ENST00000496103 208 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AC006499.2-201ENST00000513470 337 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 SCARNA3-201ENST00000517097 143 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AC084851.1-201ENST00000529105 249 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 MIR502-201ENST00000606349 86 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AC093875.1-201ENST00000623688 504 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 MIR7157-201ENST00000635801 60 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 MTND4P23-201ENST00000447723 1363 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 AC110491.1-201ENST00000562191 2010 ntBASIC1.66□□□□□ -2.14
HLA-DQB2P05538 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HLA-DQB2P05538 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
HLA-DQB2P05538 ZNF876P-202ENST00000398732 1485 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 RNU6-28P-201ENST00000362378 107 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 RNU1-39P-201ENST00000383897 165 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 MIR218-1-201ENST00000384999 110 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 RN7SKP101-201ENST00000411376 320 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 TPMTP3-201ENST00000411928 735 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AL451054.2-201ENST00000420896 202 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AC098831.1-201ENST00000440661 216 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AC080013.2-201ENST00000460866 323 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AC114981.1-201ENST00000503897 678 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQB2P05538 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.65□□□□□ -2.15
HLA-DQB2P05538 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQB2P05538 MIR3122-201ENST00000577243 73 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms