Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNU6-253P-201ENST00000384730 105 ntBASIC2.01□□□□□ -2.09
CD74P04233 MIR27B-201ENST00000385129 97 ntBASIC2.01□□□□□ -2.09
CD74P04233 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CD74P04233 AL590084.2-201ENST00000401481 382 ntBASIC2.01□□□□□ -2.09
CD74P04233 RN7SKP266-201ENST00000410232 287 ntBASIC2.01□□□□□ -2.09
CD74P04233 MTND1P21-201ENST00000412991 285 ntBASIC2.01□□□□□ -2.09
CD74P04233 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.01□□□□□ -2.09
CD74P04233 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.01□□□□□ -2.09
CD74P04233 MTND2P9-201ENST00000422293 931 ntBASIC2.01□□□□□ -2.09
CD74P04233 AL022400.1-201ENST00000423946 935 ntBASIC2.01□□□□□ -2.09
CD74P04233 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.01□□□□□ -2.09
CD74P04233 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.01□□□□□ -2.09
CD74P04233 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.01□□□□□ -2.09
CD74P04233 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.01□□□□□ -2.09
CD74P04233 AL049734.2-201ENST00000441066 616 ntBASIC2.01□□□□□ -2.09
CD74P04233 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.01□□□□□ -2.09
CD74P04233 CBWD4P-201ENST00000445695 655 ntBASIC2.01□□□□□ -2.09
CD74P04233 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.01□□□□□ -2.09
CD74P04233 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.01□□□□□ -2.09
CD74P04233 AC128713.1-201ENST00000471495 306 ntBASIC2.01□□□□□ -2.09
CD74P04233 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.01□□□□□ -2.09
CD74P04233 AC079804.2-201ENST00000490376 200 ntBASIC2.01□□□□□ -2.09
CD74P04233 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.01□□□□□ -2.09
CD74P04233 AP000889.2-201ENST00000532684 490 ntBASIC2.01□□□□□ -2.09
CD74P04233 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.01□□□□□ -2.09
CD74P04233 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.01□□□□□ -2.09
CD74P04233 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.01□□□□□ -2.09
CD74P04233 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.01□□□□□ -2.09
CD74P04233 AL354943.1-201ENST00000572103 781 ntBASIC2.01□□□□□ -2.09
CD74P04233 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.01□□□□□ -2.09
CD74P04233 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.01□□□□□ -2.09
CD74P04233 AC002545.1-201ENST00000592511 181 ntBASIC2.01□□□□□ -2.09
CD74P04233 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.01□□□□□ -2.09
CD74P04233 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.01□□□□□ -2.09
CD74P04233 AC105148.1-201ENST00000604961 409 ntBASIC2.01□□□□□ -2.09
CD74P04233 ATP1B3P1-201ENST00000605365 821 ntBASIC2.01□□□□□ -2.09
CD74P04233 AC005332.10-201ENST00000612725 619 ntBASIC2.01□□□□□ -2.09
CD74P04233 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CD74P04233 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.01□□□□□ -2.09
CD74P04233 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CD74P04233 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
CD74P04233 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CD74P04233 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.01□□□□□ -2.09
CD74P04233 RNU6-741P-201ENST00000383889 107 ntBASIC2□□□□□ -2.09
CD74P04233 RNU6-1200P-201ENST00000384162 107 ntBASIC2□□□□□ -2.09
CD74P04233 SNORA51.11-201ENST00000384442 131 ntBASIC2□□□□□ -2.09
CD74P04233 RNA5SP184-201ENST00000411071 108 ntBASIC2□□□□□ -2.09
CD74P04233 HMGB1P11-201ENST00000413899 637 ntBASIC2□□□□□ -2.09
CD74P04233 BTF3L4P3-201ENST00000418879 476 ntBASIC2□□□□□ -2.09
CD74P04233 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2□□□□□ -2.09
CD74P04233 AC092047.1-201ENST00000424997 240 ntBASIC2□□□□□ -2.09
CD74P04233 AL035407.1-201ENST00000429211 571 ntBASIC2□□□□□ -2.09
CD74P04233 MTND1P20-201ENST00000430341 950 ntBASIC2□□□□□ -2.09
CD74P04233 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2□□□□□ -2.09
CD74P04233 RPL35AP22-201ENST00000436855 335 ntBASIC2□□□□□ -2.09
CD74P04233 AL354941.1-201ENST00000438600 464 ntBASIC2□□□□□ -2.09
CD74P04233 Z82210.1-201ENST00000440037 231 ntBASIC2□□□□□ -2.09
CD74P04233 PGBD4P3-201ENST00000440731 581 ntBASIC2□□□□□ -2.09
CD74P04233 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2□□□□□ -2.09
CD74P04233 EEF1B2P7-201ENST00000451177 676 ntBASIC2□□□□□ -2.09
CD74P04233 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2□□□□□ -2.09
CD74P04233 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2□□□□□ -2.09
CD74P04233 RPL23AP45-201ENST00000476406 468 ntBASIC2□□□□□ -2.09
CD74P04233 AC022447.3-201ENST00000506865 495 ntBASIC2□□□□□ -2.09
CD74P04233 NRON-201ENST00000517270 370 ntBASIC2□□□□□ -2.09
CD74P04233 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2□□□□□ -2.09
CD74P04233 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
CD74P04233 AP004247.1-201ENST00000531556 1289 ntBASIC2□□□□□ -2.09
CD74P04233 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2□□□□□ -2.09
CD74P04233 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2□□□□□ -2.09
CD74P04233 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2□□□□□ -2.09
CD74P04233 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2□□□□□ -2.09
CD74P04233 AC136618.2-201ENST00000575091 400 ntBASIC2□□□□□ -2.09
CD74P04233 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2□□□□□ -2.09
CD74P04233 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2□□□□□ -2.09
CD74P04233 AC013244.3-201ENST00000605614 388 ntBASIC2□□□□□ -2.09
CD74P04233 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2□□□□□ -2.09
CD74P04233 SDR42E1P2-201ENST00000614861 481 ntBASIC2□□□□□ -2.09
CD74P04233 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2□□□□□ -2.09
CD74P04233 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2□□□□□ -2.09
CD74P04233 AC012640.5-201ENST00000623897 319 ntBASIC2□□□□□ -2.09
CD74P04233 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
CD74P04233 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CD74P04233 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CD74P04233 MTND5P33-201ENST00000571250 1450 ntBASIC2□□□□□ -2.09
CD74P04233 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2□□□□□ -2.09
CD74P04233 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CD74P04233 MTND4P27-201ENST00000450813 1354 ntBASIC1.99□□□□□ -2.09
CD74P04233 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
CD74P04233 AC062016.1-201ENST00000355719 319 ntBASIC1.99□□□□□ -2.09
CD74P04233 AL109755.1-201ENST00000401791 649 ntBASIC1.99□□□□□ -2.09
CD74P04233 HMGB3P2-201ENST00000411913 584 ntBASIC1.99□□□□□ -2.09
CD74P04233 NUP35P1-201ENST00000422734 947 ntBASIC1.99□□□□□ -2.09
CD74P04233 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.99□□□□□ -2.09
CD74P04233 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.99□□□□□ -2.09
CD74P04233 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.99□□□□□ -2.09
CD74P04233 Z73417.1-201ENST00000447373 778 ntBASIC1.99□□□□□ -2.09
CD74P04233 SNORD11.1-201ENST00000459482 85 ntBASIC1.99□□□□□ -2.09
CD74P04233 AC008481.1-201ENST00000463278 396 ntBASIC1.99□□□□□ -2.09
CD74P04233 AC107626.1-201ENST00000471084 183 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms