Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 RNU6-859P-201ENST00000362728 107 ntBASIC3.48□□□□□ -1.85
DDX58O95786 RNU6-270P-201ENST00000364131 105 ntBASIC3.48□□□□□ -1.85
DDX58O95786 RNU6-701P-201ENST00000384059 107 ntBASIC3.48□□□□□ -1.85
DDX58O95786 SNORA40.3-201ENST00000390964 122 ntBASIC3.48□□□□□ -1.85
DDX58O95786 RNA5SP354-201ENST00000391247 136 ntBASIC3.48□□□□□ -1.85
DDX58O95786 UBE2V1P2-201ENST00000397758 440 ntBASIC3.48□□□□□ -1.85
DDX58O95786 RAC1P6-201ENST00000423911 575 ntBASIC3.48□□□□□ -1.85
DDX58O95786 AP000936.2-201ENST00000447151 681 ntBASIC3.48□□□□□ -1.85
DDX58O95786 RNA5SP269-201ENST00000459032 137 ntBASIC3.48□□□□□ -1.85
DDX58O95786 SNORD97-201ENST00000459187 142 ntBASIC3.48□□□□□ -1.85
DDX58O95786 AC003982.1-202ENST00000469928 248 ntBASIC3.48□□□□□ -1.85
DDX58O95786 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
DDX58O95786 AC233702.1-201ENST00000482905 502 ntBASIC3.48□□□□□ -1.85
DDX58O95786 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX58O95786 SNORA31.21-201ENST00000517180 77 ntBASIC3.48□□□□□ -1.85
DDX58O95786 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.48□□□□□ -1.85
DDX58O95786 AP002453.2-201ENST00000533503 320 ntBASIC3.48□□□□□ -1.85
DDX58O95786 AC012414.6-201ENST00000568241 401 ntBASIC3.48□□□□□ -1.85
DDX58O95786 AC137800.2-201ENST00000574375 120 ntBASIC3.48□□□□□ -1.85
DDX58O95786 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX58O95786 AC009977.1-201ENST00000586015 570 ntBASIC3.48□□□□□ -1.85
DDX58O95786 HMGN1P30-201ENST00000589286 268 ntBASIC3.48□□□□□ -1.85
DDX58O95786 AP000860.1-201ENST00000605250 559 ntBASIC3.48□□□□□ -1.85
DDX58O95786 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.48□□□□□ -1.85
DDX58O95786 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
DDX58O95786 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.48□□□□□ -1.85
DDX58O95786 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
DDX58O95786 RPL9P7-201ENST00000330965 580 ntBASIC3.47□□□□□ -1.85
DDX58O95786 RNU6-217P-201ENST00000384164 104 ntBASIC3.47□□□□□ -1.85
DDX58O95786 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX58O95786 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.47□□□□□ -1.85
DDX58O95786 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.47□□□□□ -1.85
DDX58O95786 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.47□□□□□ -1.85
DDX58O95786 AC104651.1-201ENST00000427559 735 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.47□□□□□ -1.85
DDX58O95786 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX58O95786 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX58O95786 USP9YP15-201ENST00000442391 422 ntBASIC3.47□□□□□ -1.85
DDX58O95786 TAF9P1-201ENST00000445421 515 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AL109933.2-201ENST00000452651 260 ntBASIC3.47□□□□□ -1.85
DDX58O95786 TAF9P2-201ENST00000454958 515 ntBASIC3.47□□□□□ -1.85
DDX58O95786 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX58O95786 RPL31P3-201ENST00000458430 332 ntBASIC3.47□□□□□ -1.85
DDX58O95786 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX58O95786 AC093534.1-201ENST00000504977 132 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AC010587.1-201ENST00000505809 469 ntBASIC3.47□□□□□ -1.85
DDX58O95786 RNU2-10P-201ENST00000516375 211 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX58O95786 AP003467.2-201ENST00000520175 319 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX58O95786 MIR3605-201ENST00000583214 100 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AL670379.6-201ENST00000603753 252 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AL670379.11-201ENST00000604059 253 ntBASIC3.47□□□□□ -1.85
DDX58O95786 SEPT7P9-203ENST00000604116 343 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AC008162.1-201ENST00000604718 254 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AL670379.1-201ENST00000604752 252 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AL670379.5-201ENST00000605253 252 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AL670379.12-201ENST00000605291 253 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AL670379.8-201ENST00000605353 252 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AL670379.7-201ENST00000605823 252 ntBASIC3.47□□□□□ -1.85
DDX58O95786 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
DDX58O95786 AC092140.2-201ENST00000618027 521 ntBASIC3.47□□□□□ -1.85
DDX58O95786 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX58O95786 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX58O95786 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
DDX58O95786 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
DDX58O95786 FGF7P2-201ENST00000332473 296 ntBASIC3.46□□□□□ -1.86
DDX58O95786 FTLP6-201ENST00000355274 422 ntBASIC3.46□□□□□ -1.86
DDX58O95786 RNU6-1167P-201ENST00000363227 94 ntBASIC3.46□□□□□ -1.86
DDX58O95786 RNU1-105P-201ENST00000363470 161 ntBASIC3.46□□□□□ -1.86
DDX58O95786 RNY4P34-201ENST00000364779 95 ntBASIC3.46□□□□□ -1.86
DDX58O95786 MIR181A2-201ENST00000384863 110 ntBASIC3.46□□□□□ -1.86
DDX58O95786 RNU2-52P-201ENST00000410680 190 ntBASIC3.46□□□□□ -1.86
DDX58O95786 HMGN1P14-201ENST00000412459 517 ntBASIC3.46□□□□□ -1.86
DDX58O95786 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.46□□□□□ -1.86
DDX58O95786 AC137499.1-201ENST00000427602 88 ntBASIC3.46□□□□□ -1.86
DDX58O95786 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX58O95786 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.46□□□□□ -1.86
DDX58O95786 MTND4P25-201ENST00000441039 533 ntBASIC3.46□□□□□ -1.86
DDX58O95786 AC093392.2-201ENST00000450682 337 ntBASIC3.46□□□□□ -1.86
DDX58O95786 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
DDX58O95786 AC108938.1-201ENST00000451204 136 ntBASIC3.46□□□□□ -1.86
DDX58O95786 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX58O95786 AL033528.1-201ENST00000453780 140 ntBASIC3.46□□□□□ -1.86
DDX58O95786 snoU109.1-201ENST00000459339 135 ntBASIC3.46□□□□□ -1.86
DDX58O95786 RPS29P12-201ENST00000460178 152 ntBASIC3.46□□□□□ -1.86
DDX58O95786 AC087588.1-201ENST00000462203 316 ntBASIC3.46□□□□□ -1.86
DDX58O95786 RBM43P1-201ENST00000476891 1081 ntBASIC3.46□□□□□ -1.86
DDX58O95786 RN7SL432P-201ENST00000484057 298 ntBASIC3.46□□□□□ -1.86
DDX58O95786 AC092185.1-201ENST00000491371 97 ntBASIC3.46□□□□□ -1.86
DDX58O95786 NDUFB4P2-201ENST00000509515 391 ntBASIC3.46□□□□□ -1.86
DDX58O95786 SNORA9.3-201ENST00000516383 129 ntBASIC3.46□□□□□ -1.86
DDX58O95786 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX58O95786 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
DDX58O95786 AL589994.2-201ENST00000621124 579 ntBASIC3.46□□□□□ -1.86
DDX58O95786 AC005858.4-201ENST00000623191 700 ntBASIC3.46□□□□□ -1.86
DDX58O95786 AC110994.2-201ENST00000635481 492 ntBASIC3.46□□□□□ -1.86
DDX58O95786 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
DDX58O95786 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX58O95786 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms