Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.87□□□□□ -2.11
UPK1BO75841 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UPK1BO75841 RPS3AP23-202ENST00000574601 686 ntBASIC1.87□□□□□ -2.11
UPK1BO75841 MIR4765-201ENST00000585007 77 ntBASIC1.87□□□□□ -2.11
UPK1BO75841 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.87□□□□□ -2.11
UPK1BO75841 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.87□□□□□ -2.11
UPK1BO75841 RPS15AP11-201ENST00000594193 385 ntBASIC1.87□□□□□ -2.11
UPK1BO75841 AC091152.3-201ENST00000604227 325 ntBASIC1.87□□□□□ -2.11
UPK1BO75841 AL450336.1-201ENST00000605180 586 ntBASIC1.87□□□□□ -2.11
UPK1BO75841 AC080013.3-201ENST00000606839 578 ntBASIC1.87□□□□□ -2.11
UPK1BO75841 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.87□□□□□ -2.11
UPK1BO75841 AF129408.1-201ENST00000608767 431 ntBASIC1.87□□□□□ -2.11
UPK1BO75841 AC009090.3-201ENST00000616553 565 ntBASIC1.87□□□□□ -2.11
UPK1BO75841 AC012640.5-201ENST00000623897 319 ntBASIC1.87□□□□□ -2.11
UPK1BO75841 PISRT1-201ENST00000626175 531 ntBASIC1.87□□□□□ -2.11
UPK1BO75841 MIR7157-201ENST00000635801 60 ntBASIC1.87□□□□□ -2.11
UPK1BO75841 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
UPK1BO75841 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
UPK1BO75841 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.86□□□□□ -2.11
UPK1BO75841 RNU6-462P-201ENST00000362659 105 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 SNORA67.4-201ENST00000384688 142 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 AL356967.1-201ENST00000406305 431 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.86□□□□□ -2.11
UPK1BO75841 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.86□□□□□ -2.11
UPK1BO75841 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.86□□□□□ -2.11
UPK1BO75841 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.86□□□□□ -2.11
UPK1BO75841 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.86□□□□□ -2.11
UPK1BO75841 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.86□□□□□ -2.11
UPK1BO75841 MTCO2P20-201ENST00000437339 673 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 AL451074.3-201ENST00000437709 472 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 EXOSC3P1-201ENST00000448649 500 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.86□□□□□ -2.11
UPK1BO75841 OR6C5P-201ENST00000452388 923 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 PRSS3P4-201ENST00000453323 162 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.86□□□□□ -2.11
UPK1BO75841 RNU7-59P-201ENST00000459101 61 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 RPL37P6-201ENST00000460682 294 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 AP001324.2-201ENST00000461163 319 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
UPK1BO75841 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
UPK1BO75841 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.86□□□□□ -2.11
UPK1BO75841 SNORA25.11-201ENST00000515935 105 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
UPK1BO75841 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.86□□□□□ -2.11
UPK1BO75841 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.86□□□□□ -2.11
UPK1BO75841 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.86□□□□□ -2.11
UPK1BO75841 AC009127.3-201ENST00000570531 403 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.86□□□□□ -2.11
UPK1BO75841 AL109618.2-201ENST00000605527 211 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 AC097468.3-201ENST00000607956 456 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 AC069294.1-201ENST00000608397 350 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 AC018645.2-201ENST00000609151 472 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 AC084757.4-201ENST00000616350 526 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 AL136981.2-201ENST00000617319 734 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.86□□□□□ -2.11
UPK1BO75841 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.86□□□□□ -2.11
UPK1BO75841 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
UPK1BO75841 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
UPK1BO75841 AC099786.3-201ENST00000565735 1410 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
UPK1BO75841 RNU6-859P-201ENST00000362728 107 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 SNORA38.1-201ENST00000364172 131 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 RNU6-1242P-201ENST00000391052 103 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 AL021407.1-201ENST00000404531 386 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 RN7SKP266-201ENST00000410232 287 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.85□□□□□ -2.11
UPK1BO75841 BX276092.3-201ENST00000424182 230 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 RPL35AP12-201ENST00000425362 338 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 ISCA1P1-201ENST00000426679 387 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 AC104651.1-201ENST00000427559 735 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 TXNL1P1-201ENST00000429528 554 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK1BO75841 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK1BO75841 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
UPK1BO75841 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK1BO75841 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.85□□□□□ -2.11
UPK1BO75841 SNORA84-201ENST00000459229 133 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 AC055855.1-201ENST00000489563 579 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
UPK1BO75841 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK1BO75841 AC112206.4-201ENST00000515142 405 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 RNU6-581P-201ENST00000516214 105 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 AL049838.1-201ENST00000563647 981 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.85□□□□□ -2.11
UPK1BO75841 ROCK1P1-201ENST00000573767 549 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK1BO75841 AC105245.1-201ENST00000581934 244 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 MIR4293-201ENST00000584305 78 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.85□□□□□ -2.11
UPK1BO75841 NRBF2P1-201ENST00000587407 859 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 AL158050.2-201ENST00000605336 568 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.85□□□□□ -2.11
UPK1BO75841 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK1BO75841 AL449363.1-201ENST00000617815 186 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 AL049777.1-201ENST00000622740 518 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 AL356596.1-201ENST00000624230 379 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms