Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 NIPA2P2-201ENST00000496376 1083 ntBASIC3.24□□□□□ -1.89
LDB3O75112 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.24□□□□□ -1.89
LDB3O75112 SNORA31.8-201ENST00000516327 108 ntBASIC3.24□□□□□ -1.89
LDB3O75112 BTF3P12-201ENST00000519620 469 ntBASIC3.24□□□□□ -1.89
LDB3O75112 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.24□□□□□ -1.89
LDB3O75112 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB3O75112 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LDB3O75112 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB3O75112 AC007458.1-201ENST00000542812 373 ntBASIC3.24□□□□□ -1.89
LDB3O75112 AC128657.1-201ENST00000549459 145 ntBASIC3.24□□□□□ -1.89
LDB3O75112 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB3O75112 HMGB1P6-201ENST00000569046 646 ntBASIC3.24□□□□□ -1.89
LDB3O75112 AL355375.2-201ENST00000574825 175 ntBASIC3.24□□□□□ -1.89
LDB3O75112 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.24□□□□□ -1.89
LDB3O75112 AP001330.4-201ENST00000604350 154 ntBASIC3.24□□□□□ -1.89
LDB3O75112 AL133255.1-201ENST00000606374 441 ntBASIC3.24□□□□□ -1.89
LDB3O75112 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB3O75112 AL391261.4-201ENST00000616012 481 ntBASIC3.24□□□□□ -1.89
LDB3O75112 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.24□□□□□ -1.89
LDB3O75112 AL136313.1-201ENST00000624804 202 ntBASIC3.24□□□□□ -1.89
LDB3O75112 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.24□□□□□ -1.89
LDB3O75112 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
LDB3O75112 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
LDB3O75112 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LDB3O75112 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB3O75112 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.24□□□□□ -1.89
LDB3O75112 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.24□□□□□ -1.89
LDB3O75112 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LDB3O75112 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.23□□□□□ -1.89
LDB3O75112 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.23□□□□□ -1.89
LDB3O75112 NACAP2-201ENST00000318548 624 ntBASIC3.23□□□□□ -1.89
LDB3O75112 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LDB3O75112 RNU6-511P-201ENST00000363496 107 ntBASIC3.23□□□□□ -1.89
LDB3O75112 RNU6-1097P-201ENST00000363586 107 ntBASIC3.23□□□□□ -1.89
LDB3O75112 Y_RNA.166-201ENST00000363730 102 ntBASIC3.23□□□□□ -1.89
LDB3O75112 MIR449B-201ENST00000384995 97 ntBASIC3.23□□□□□ -1.89
LDB3O75112 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LDB3O75112 UBE2V1P2-201ENST00000397758 440 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AL136372.1-201ENST00000403060 228 ntBASIC3.23□□□□□ -1.89
LDB3O75112 MIR1183-201ENST00000408856 89 ntBASIC3.23□□□□□ -1.89
LDB3O75112 Y_RNA.615-201ENST00000410769 117 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.23□□□□□ -1.89
LDB3O75112 NDUFB4P5-201ENST00000415445 361 ntBASIC3.23□□□□□ -1.89
LDB3O75112 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.23□□□□□ -1.89
LDB3O75112 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LDB3O75112 PPP1R11P2-201ENST00000423543 382 ntBASIC3.23□□□□□ -1.89
LDB3O75112 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC079781.2-201ENST00000446424 169 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC073415.1-201ENST00000449240 153 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC140076.1-201ENST00000449897 361 ntBASIC3.23□□□□□ -1.89
LDB3O75112 MRPS31P2-201ENST00000451581 518 ntBASIC3.23□□□□□ -1.89
LDB3O75112 RNU7-63P-201ENST00000459054 62 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC006512.1-201ENST00000468816 291 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC078785.3-201ENST00000476607 425 ntBASIC3.23□□□□□ -1.89
LDB3O75112 RN7SL293P-201ENST00000481765 281 ntBASIC3.23□□□□□ -1.89
LDB3O75112 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.23□□□□□ -1.89
LDB3O75112 HMGN1P13-201ENST00000505795 138 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC026427.2-201ENST00000506228 536 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB3O75112 AC117522.3-201ENST00000507974 584 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC100870.1-201ENST00000522035 505 ntBASIC3.23□□□□□ -1.89
LDB3O75112 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LDB3O75112 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.23□□□□□ -1.89
LDB3O75112 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.23□□□□□ -1.89
LDB3O75112 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.23□□□□□ -1.89
LDB3O75112 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB3O75112 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB3O75112 MIR4644-201ENST00000579929 84 ntBASIC3.23□□□□□ -1.89
LDB3O75112 MIR4444-1-201ENST00000581696 74 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.23□□□□□ -1.89
LDB3O75112 MIR4444-2-201ENST00000584390 74 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC105224.1-201ENST00000587055 421 ntBASIC3.23□□□□□ -1.89
LDB3O75112 VN1R80P-201ENST00000597126 338 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC013553.2-201ENST00000604244 589 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC012443.1-201ENST00000605605 231 ntBASIC3.23□□□□□ -1.89
LDB3O75112 RNVU1-4-201ENST00000612985 164 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB3O75112 AC244100.1-202ENST00000621554 382 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AC090574.1-201ENST00000623186 233 ntBASIC3.23□□□□□ -1.89
LDB3O75112 AL133216.2-202ENST00000634512 349 ntBASIC3.23□□□□□ -1.89
LDB3O75112 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LDB3O75112 AL513302.2-201ENST00000562313 1842 ntBASIC3.23□□□□□ -1.89
LDB3O75112 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.23□□□□□ -1.89
LDB3O75112 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LDB3O75112 AC032011.1-201ENST00000611703 1549 ntBASIC3.23□□□□□ -1.89
LDB3O75112 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.23□□□□□ -1.89
LDB3O75112 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.23□□□□□ -1.89
LDB3O75112 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LDB3O75112 PRO1804-201ENST00000623780 2050 ntBASIC3.23□□□□□ -1.89
LDB3O75112 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
LDB3O75112 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.22□□□□□ -1.89
LDB3O75112 OR4G1P-203ENST00000641984 1631 ntBASIC3.22□□□□□ -1.89
LDB3O75112 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LDB3O75112 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.22□□□□□ -1.89
LDB3O75112 ASNSP3-201ENST00000451989 1306 ntBASIC3.22□□□□□ -1.89
LDB3O75112 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LDB3O75112 AC058791.1-201ENST00000608412 3198 ntBASIC3.22□□□□□ -1.89
LDB3O75112 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LDB3O75112 SNORA71.3-201ENST00000362582 128 ntBASIC3.22□□□□□ -1.89
LDB3O75112 RNA5SP197-201ENST00000363357 119 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms