Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 Y_RNA.576-201ENST00000384781 102 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 AL591034.1-201ENST00000407447 340 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 SNORA11.2-201ENST00000408318 127 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNND1O60716 RPL21P109-201ENST00000422213 475 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 NDUFB4P6-201ENST00000436819 366 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNND1O60716 AC016691.1-201ENST00000441321 413 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 RPS29P31-201ENST00000446147 164 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 MTND1P18-201ENST00000448191 573 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.01□□□□□ -1.77
CTNND1O60716 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNND1O60716 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNND1O60716 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.01□□□□□ -1.77
CTNND1O60716 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNND1O60716 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNND1O60716 AC084357.1-201ENST00000473404 255 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 AL160314.1-201ENST00000490836 438 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 RPL30P5-201ENST00000494923 336 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 AC110794.1-201ENST00000505816 425 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 TTC39CP1-201ENST00000512513 755 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 Y_RNA.689-201ENST00000516589 107 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 RNA5SP291-201ENST00000517222 105 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNND1O60716 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNND1O60716 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNND1O60716 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.01□□□□□ -1.77
CTNND1O60716 ADI1P3-201ENST00000549509 470 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNND1O60716 AC034105.3-201ENST00000565294 442 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 MIR4325-201ENST00000583049 90 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 AL162413.1-201ENST00000603198 110 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 AC135507.2-201ENST00000612443 309 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CTNND1O60716 AC011155.2-201ENST00000623202 216 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 MTND1P37-201ENST00000636562 264 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 AC002546.1-201ENST00000588041 2504 ntBASIC4□□□□□ -1.77
CTNND1O60716 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
CTNND1O60716 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4□□□□□ -1.77
CTNND1O60716 RNA5SP374-201ENST00000362939 125 ntBASIC4□□□□□ -1.77
CTNND1O60716 RNU6-1090P-201ENST00000364065 94 ntBASIC4□□□□□ -1.77
CTNND1O60716 RNU6-996P-201ENST00000365438 107 ntBASIC4□□□□□ -1.77
CTNND1O60716 RNU6-741P-201ENST00000383889 107 ntBASIC4□□□□□ -1.77
CTNND1O60716 RNU6-190P-201ENST00000384154 102 ntBASIC4□□□□□ -1.77
CTNND1O60716 RPS12P24-201ENST00000412619 387 ntBASIC4□□□□□ -1.77
CTNND1O60716 BTF3L4P3-201ENST00000418879 476 ntBASIC4□□□□□ -1.77
CTNND1O60716 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4□□□□□ -1.77
CTNND1O60716 AC006989.1-201ENST00000427212 131 ntBASIC4□□□□□ -1.77
CTNND1O60716 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4□□□□□ -1.77
CTNND1O60716 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4□□□□□ -1.77
CTNND1O60716 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4□□□□□ -1.77
CTNND1O60716 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4□□□□□ -1.77
CTNND1O60716 RPS29P15-201ENST00000458329 171 ntBASIC4□□□□□ -1.77
CTNND1O60716 RPL37P6-201ENST00000460682 294 ntBASIC4□□□□□ -1.77
CTNND1O60716 GMFBP1-201ENST00000467831 427 ntBASIC4□□□□□ -1.77
CTNND1O60716 AC092989.1-201ENST00000481235 277 ntBASIC4□□□□□ -1.77
CTNND1O60716 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4□□□□□ -1.77
CTNND1O60716 AL163973.1-201ENST00000484753 577 ntBASIC4□□□□□ -1.77
CTNND1O60716 MTAPP1-201ENST00000489154 819 ntBASIC4□□□□□ -1.77
CTNND1O60716 RPL39P36-201ENST00000490784 156 ntBASIC4□□□□□ -1.77
CTNND1O60716 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4□□□□□ -1.77
CTNND1O60716 RNA5SP503-201ENST00000517047 117 ntBASIC4□□□□□ -1.77
CTNND1O60716 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4□□□□□ -1.77
CTNND1O60716 AC008521.1-201ENST00000587471 187 ntBASIC4□□□□□ -1.77
CTNND1O60716 AC103710.3-201ENST00000608157 948 ntBASIC4□□□□□ -1.77
CTNND1O60716 AC012409.4-201ENST00000612923 249 ntBASIC4□□□□□ -1.77
CTNND1O60716 AL359547.2-201ENST00000615810 418 ntBASIC4□□□□□ -1.77
CTNND1O60716 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4□□□□□ -1.77
CTNND1O60716 AC006020.1-201ENST00000420179 1854 ntBASIC4□□□□□ -1.77
CTNND1O60716 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4□□□□□ -1.77
CTNND1O60716 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4□□□□□ -1.77
CTNND1O60716 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4□□□□□ -1.77
CTNND1O60716 TNPO1P3-201ENST00000436471 2662 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 AC007785.2-201ENST00000598627 1916 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTNND1O60716 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTNND1O60716 UBE2L2-201ENST00000254302 429 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 RNU6-1167P-201ENST00000363227 94 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 Y_RNA.255-201ENST00000364581 97 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.99□□□□□ -1.77
CTNND1O60716 SNORA69-201ENST00000383895 132 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 RNU6-1029P-201ENST00000384109 107 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 MIR1277-201ENST00000408536 78 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 CALM2P2-201ENST00000428512 440 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 AC007919.1-201ENST00000429380 217 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.99□□□□□ -1.77
CTNND1O60716 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.99□□□□□ -1.77
CTNND1O60716 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.99□□□□□ -1.77
CTNND1O60716 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.99□□□□□ -1.77
CTNND1O60716 AC104806.1-201ENST00000508720 308 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 APOOP4-201ENST00000513530 597 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 RN7SKP83-201ENST00000516512 178 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.99□□□□□ -1.77
CTNND1O60716 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.99□□□□□ -1.77
CTNND1O60716 AL121576.1-201ENST00000556055 276 ntBASIC3.99□□□□□ -1.77
CTNND1O60716 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.99□□□□□ -1.77
CTNND1O60716 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.99□□□□□ -1.77
CTNND1O60716 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.99□□□□□ -1.77
CTNND1O60716 MIR4644-201ENST00000579929 84 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms