Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.91□□□□□ -2.26
SSSCA1O60232 RPS20P22-201ENST00000473700 357 ntBASIC0.91□□□□□ -2.26
SSSCA1O60232 AC113420.1-201ENST00000507903 571 ntBASIC0.91□□□□□ -2.26
SSSCA1O60232 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.91□□□□□ -2.26
SSSCA1O60232 AC034114.1-201ENST00000520293 285 ntBASIC0.91□□□□□ -2.26
SSSCA1O60232 SUMO2P14-201ENST00000604488 293 ntBASIC0.91□□□□□ -2.26
SSSCA1O60232 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.91□□□□□ -2.26
SSSCA1O60232 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SSSCA1O60232 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
SSSCA1O60232 MFSD8-213ENST00000641134 1327 ntBASIC0.9□□□□□ -2.26
SSSCA1O60232 SNORD14B-201ENST00000364533 90 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
SSSCA1O60232 HMGB1P17-201ENST00000403495 628 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 TXNP7-201ENST00000406296 293 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 RNU2-63P-201ENST00000410792 194 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.9□□□□□ -2.27
SSSCA1O60232 MED14P1-201ENST00000430517 648 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 Z85994.2-201ENST00000434327 452 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.9□□□□□ -2.27
SSSCA1O60232 RPS29P28-201ENST00000446439 141 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.9□□□□□ -2.27
SSSCA1O60232 OR2A41P-201ENST00000473586 105 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.9□□□□□ -2.27
SSSCA1O60232 AC092902.1-201ENST00000486999 259 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 RPL36AP21-201ENST00000490372 323 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.9□□□□□ -2.27
SSSCA1O60232 RNU6-1256P-201ENST00000516539 103 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 OR8K4P-201ENST00000534608 872 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 MIR4303-201ENST00000581299 66 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.9□□□□□ -2.27
SSSCA1O60232 AC073413.2-201ENST00000604332 360 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.9□□□□□ -2.27
SSSCA1O60232 AL445493.3-201ENST00000619568 477 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 AL356585.4-201ENST00000623078 1229 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 AC017104.5-201ENST00000637647 639 ntBASIC0.9□□□□□ -2.27
SSSCA1O60232 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SSSCA1O60232 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
SSSCA1O60232 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.9□□□□□ -2.27
SSSCA1O60232 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.9□□□□□ -2.27
SSSCA1O60232 MTND5P30-201ENST00000452896 1731 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.89□□□□□ -2.27
SSSCA1O60232 RNU6-670P-201ENST00000364312 104 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 RNU6-217P-201ENST00000384164 104 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 SNORD51-201ENST00000384320 80 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.89□□□□□ -2.27
SSSCA1O60232 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.89□□□□□ -2.27
SSSCA1O60232 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC0.89□□□□□ -2.27
SSSCA1O60232 AL121882.1-201ENST00000422893 417 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.89□□□□□ -2.27
SSSCA1O60232 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.89□□□□□ -2.27
SSSCA1O60232 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.89□□□□□ -2.27
SSSCA1O60232 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.89□□□□□ -2.27
SSSCA1O60232 HMGN3P1-201ENST00000453847 193 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.89□□□□□ -2.27
SSSCA1O60232 RPL26P9-201ENST00000457466 433 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 RPS27P23-201ENST00000487608 251 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.89□□□□□ -2.27
SSSCA1O60232 RNU1-41P-201ENST00000516161 162 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 RNU1-48P-201ENST00000516400 162 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.89□□□□□ -2.27
SSSCA1O60232 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.89□□□□□ -2.27
SSSCA1O60232 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.89□□□□□ -2.27
SSSCA1O60232 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.89□□□□□ -2.27
SSSCA1O60232 MIR4765-201ENST00000585007 77 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 AC023043.2-201ENST00000589678 1026 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 AF131215.7-201ENST00000602443 707 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 AL121652.1-201ENST00000608851 448 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.89□□□□□ -2.27
SSSCA1O60232 AC009233.1-201ENST00000616477 371 ntBASIC0.89□□□□□ -2.27
SSSCA1O60232 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.89□□□□□ -2.27
SSSCA1O60232 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.89□□□□□ -2.27
SSSCA1O60232 RNU5A-1-201ENST00000362698 116 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 MIR135A2-201ENST00000384854 100 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SSSCA1O60232 AC092047.1-201ENST00000424997 240 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.88□□□□□ -2.27
SSSCA1O60232 MTND2P29-201ENST00000438595 412 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 PIGFP3-201ENST00000441918 722 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 AL049874.1-201ENST00000489560 388 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 AC099513.1-201ENST00000490423 301 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 AP000926.3-201ENST00000497201 299 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 RNA5SP445-201ENST00000515889 115 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 LSM6P2-201ENST00000552208 177 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.88□□□□□ -2.27
SSSCA1O60232 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.88□□□□□ -2.27
SSSCA1O60232 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
SSSCA1O60232 AC023825.1-201ENST00000566704 1030 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.88□□□□□ -2.27
SSSCA1O60232 AL022067.1-201ENST00000602426 454 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 AC011374.2-201ENST00000607135 526 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 AC007349.4-201ENST00000608114 532 ntBASIC0.88□□□□□ -2.27
SSSCA1O60232 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 AP000560.1-201ENST00000624150 1937 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 RNU2-43P-201ENST00000410306 190 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 RPS24P7-201ENST00000416921 246 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.87□□□□□ -2.27
SSSCA1O60232 AL590233.1-201ENST00000430017 456 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms