Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.85□□□□□ -2.11
SGCEO43556 AL096840.1-201ENST00000603287 93 ntBASIC1.85□□□□□ -2.11
SGCEO43556 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
SGCEO43556 AC068880.4-201ENST00000623082 495 ntBASIC1.85□□□□□ -2.11
SGCEO43556 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.85□□□□□ -2.11
SGCEO43556 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
SGCEO43556 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.11
SGCEO43556 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SGCEO43556 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SGCEO43556 RNU6-343P-201ENST00000364709 104 ntBASIC1.84□□□□□ -2.11
SGCEO43556 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.84□□□□□ -2.11
SGCEO43556 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.84□□□□□ -2.11
SGCEO43556 AIMP1P2-201ENST00000425294 312 ntBASIC1.84□□□□□ -2.11
SGCEO43556 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.84□□□□□ -2.11
SGCEO43556 Z98742.2-201ENST00000431564 187 ntBASIC1.84□□□□□ -2.11
SGCEO43556 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.84□□□□□ -2.11
SGCEO43556 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.84□□□□□ -2.11
SGCEO43556 RPL7P36-201ENST00000444633 681 ntBASIC1.84□□□□□ -2.11
SGCEO43556 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
SGCEO43556 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.84□□□□□ -2.11
SGCEO43556 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.84□□□□□ -2.11
SGCEO43556 AC104563.1-201ENST00000476147 376 ntBASIC1.84□□□□□ -2.11
SGCEO43556 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.84□□□□□ -2.11
SGCEO43556 AC093801.2-201ENST00000503966 1050 ntBASIC1.84□□□□□ -2.11
SGCEO43556 AC010486.1-201ENST00000511793 424 ntBASIC1.84□□□□□ -2.11
SGCEO43556 MRPS33P3-201ENST00000513456 322 ntBASIC1.84□□□□□ -2.11
SGCEO43556 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.84□□□□□ -2.11
SGCEO43556 RNU6-927P-201ENST00000516199 100 ntBASIC1.84□□□□□ -2.11
SGCEO43556 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.84□□□□□ -2.11
SGCEO43556 AC087897.1-201ENST00000550134 156 ntBASIC1.84□□□□□ -2.11
SGCEO43556 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.84□□□□□ -2.11
SGCEO43556 MIR4529-201ENST00000578110 78 ntBASIC1.84□□□□□ -2.11
SGCEO43556 MIR3935-201ENST00000583472 104 ntBASIC1.84□□□□□ -2.11
SGCEO43556 AC005776.1-201ENST00000603164 290 ntBASIC1.84□□□□□ -2.11
SGCEO43556 RPP40P2-201ENST00000603596 712 ntBASIC1.84□□□□□ -2.11
SGCEO43556 AL121652.1-201ENST00000608851 448 ntBASIC1.84□□□□□ -2.11
SGCEO43556 AC009237.15-201ENST00000610252 501 ntBASIC1.84□□□□□ -2.11
SGCEO43556 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.84□□□□□ -2.11
SGCEO43556 AC104763.3-201ENST00000613765 618 ntBASIC1.84□□□□□ -2.11
SGCEO43556 AL590808.1-201ENST00000618696 141 ntBASIC1.84□□□□□ -2.11
SGCEO43556 AC024581.2-201ENST00000619986 252 ntBASIC1.84□□□□□ -2.11
SGCEO43556 SDR42E1P4-201ENST00000620894 481 ntBASIC1.84□□□□□ -2.11
SGCEO43556 AC231657.1-201ENST00000624313 397 ntBASIC1.84□□□□□ -2.11
SGCEO43556 AC011477.1-204ENST00000623416 1325 ntBASIC1.84□□□□□ -2.12
SGCEO43556 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SGCEO43556 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.83□□□□□ -2.12
SGCEO43556 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SGCEO43556 MTCO1P56-201ENST00000401674 224 ntBASIC1.83□□□□□ -2.12
SGCEO43556 AL603865.2-201ENST00000401679 213 ntBASIC1.83□□□□□ -2.12
SGCEO43556 AL356421.1-201ENST00000403255 413 ntBASIC1.83□□□□□ -2.12
SGCEO43556 RNA5SP425-201ENST00000410336 112 ntBASIC1.83□□□□□ -2.12
SGCEO43556 RPL17P12-201ENST00000413391 526 ntBASIC1.83□□□□□ -2.12
SGCEO43556 MTND1P28-201ENST00000435623 950 ntBASIC1.83□□□□□ -2.12
SGCEO43556 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SGCEO43556 HMGN2P10-201ENST00000448085 265 ntBASIC1.83□□□□□ -2.12
SGCEO43556 HMGN1P5-201ENST00000448591 263 ntBASIC1.83□□□□□ -2.12
SGCEO43556 CECR9-201ENST00000453421 199 ntBASIC1.83□□□□□ -2.12
SGCEO43556 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.83□□□□□ -2.12
SGCEO43556 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
SGCEO43556 RPL22P13-201ENST00000493291 347 ntBASIC1.83□□□□□ -2.12
SGCEO43556 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.83□□□□□ -2.12
SGCEO43556 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.83□□□□□ -2.12
SGCEO43556 MTND5P13-201ENST00000513046 1079 ntBASIC1.83□□□□□ -2.12
SGCEO43556 RNU1-40P-201ENST00000516816 164 ntBASIC1.83□□□□□ -2.12
SGCEO43556 RNU1-97P-201ENST00000516872 164 ntBASIC1.83□□□□□ -2.12
SGCEO43556 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
SGCEO43556 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.83□□□□□ -2.12
SGCEO43556 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.83□□□□□ -2.12
SGCEO43556 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.83□□□□□ -2.12
SGCEO43556 MIR1273D-201ENST00000577266 86 ntBASIC1.83□□□□□ -2.12
SGCEO43556 MIR3167-201ENST00000579623 85 ntBASIC1.83□□□□□ -2.12
SGCEO43556 MIR5002-201ENST00000584713 97 ntBASIC1.83□□□□□ -2.12
SGCEO43556 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.83□□□□□ -2.12
SGCEO43556 AP001269.3-201ENST00000588718 329 ntBASIC1.83□□□□□ -2.12
SGCEO43556 AC005261.5-201ENST00000596280 355 ntBASIC1.83□□□□□ -2.12
SGCEO43556 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.83□□□□□ -2.12
SGCEO43556 AL355598.1-201ENST00000604169 202 ntBASIC1.83□□□□□ -2.12
SGCEO43556 AC011939.3-201ENST00000613686 466 ntBASIC1.83□□□□□ -2.12
SGCEO43556 AC023158.2-201ENST00000614876 543 ntBASIC1.83□□□□□ -2.12
SGCEO43556 AC010378.1-201ENST00000619270 362 ntBASIC1.83□□□□□ -2.12
SGCEO43556 AC010149.2-201ENST00000637608 315 ntBASIC1.83□□□□□ -2.12
SGCEO43556 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
SGCEO43556 RNU2-63P-201ENST00000410792 194 ntBASIC1.82□□□□□ -2.12
SGCEO43556 RNU2-68P-201ENST00000410878 191 ntBASIC1.82□□□□□ -2.12
SGCEO43556 AL139413.1-201ENST00000421309 217 ntBASIC1.82□□□□□ -2.12
SGCEO43556 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.82□□□□□ -2.12
SGCEO43556 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.82□□□□□ -2.12
SGCEO43556 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.82□□□□□ -2.12
SGCEO43556 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.82□□□□□ -2.12
SGCEO43556 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SGCEO43556 AL161651.1-201ENST00000440882 223 ntBASIC1.82□□□□□ -2.12
SGCEO43556 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.82□□□□□ -2.12
SGCEO43556 AL591719.1-201ENST00000444669 744 ntBASIC1.82□□□□□ -2.12
SGCEO43556 RPL23AP7-203ENST00000449021 469 ntBASIC1.82□□□□□ -2.12
SGCEO43556 AL353705.4-201ENST00000449661 238 ntBASIC1.82□□□□□ -2.12
SGCEO43556 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.82□□□□□ -2.12
SGCEO43556 AC025033.1-201ENST00000463883 194 ntBASIC1.82□□□□□ -2.12
SGCEO43556 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.82□□□□□ -2.12
SGCEO43556 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.82□□□□□ -2.12
SGCEO43556 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms