Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.61□□□□□ -1.99
CLDN3O15551 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.61□□□□□ -1.99
CLDN3O15551 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.61□□□□□ -1.99
CLDN3O15551 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.61□□□□□ -1.99
CLDN3O15551 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN3O15551 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.61□□□□□ -1.99
CLDN3O15551 MTND4P33-201ENST00000556706 766 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 AC061975.8-201ENST00000587058 721 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN3O15551 AP000403.1-201ENST00000603349 851 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 AC103810.6-201ENST00000606708 136 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 OR10AB1P-201ENST00000609613 938 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 AC046143.2-201ENST00000609789 160 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 MIR3199-2-201ENST00000636243 86 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLDN3O15551 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 AC016717.2-201ENST00000609089 5141 ntBASIC2.61□□□□□ -1.99
CLDN3O15551 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
CLDN3O15551 ELF2P3-201ENST00000445099 1506 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN3O15551 FAM133CP-201ENST00000332869 704 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 RNA5SP289-201ENST00000362332 137 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 U8.8-201ENST00000365399 135 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.6□□□□□ -1.99
CLDN3O15551 RNU1-73P-201ENST00000383971 164 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 RNU6-83P-201ENST00000384568 112 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CLDN3O15551 AL445529.1-201ENST00000398713 389 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN3O15551 AC096649.2-201ENST00000416186 393 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 AL139413.1-201ENST00000421309 217 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 SKA2P1-201ENST00000425592 390 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 GPM6BP2-201ENST00000432046 144 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN3O15551 OSTCP8-201ENST00000445117 448 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 GPM6BP1-201ENST00000446387 144 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 AC128713.1-201ENST00000471495 306 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.6□□□□□ -1.99
CLDN3O15551 AC090096.1-201ENST00000489168 390 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 RNU5F-8P-201ENST00000515941 111 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 RN7SKP258-201ENST00000517151 304 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 SCARNA11.3-201ENST00000517276 130 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.6□□□□□ -1.99
CLDN3O15551 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN3O15551 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN3O15551 NACAP3-201ENST00000552100 481 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 MTND1P8-201ENST00000571424 950 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 MIR4435-1-201ENST00000582552 80 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 AC098826.3-201ENST00000603823 466 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 AL161798.1-201ENST00000604630 131 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 AC135507.1-201ENST00000607214 561 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 AC091965.4-201ENST00000607691 587 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 AC067747.1-201ENST00000608026 250 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN3O15551 AC010149.2-201ENST00000637608 315 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 AC006927.4-201ENST00000639187 543 ntBASIC2.6□□□□□ -1.99
CLDN3O15551 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN3O15551 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CLDN3O15551 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN3O15551 AC004520.1-201ENST00000608362 1413 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 AC010889.1-201ENST00000566193 2666 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLDN3O15551 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLDN3O15551 SNORD114-30-201ENST00000364448 72 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 RNU6-769P-201ENST00000384407 104 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 RPS4XP7-201ENST00000406274 780 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 HMGB1P11-201ENST00000413899 637 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN3O15551 AL035407.1-201ENST00000429211 571 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 HMGB1P9-201ENST00000429856 646 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 HMGB1P27-201ENST00000431429 603 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 RPL7P36-201ENST00000444633 681 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.59□□□□□ -1.99
CLDN3O15551 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN3O15551 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLDN3O15551 AC022447.1-201ENST00000515358 464 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.59□□□□□ -1.99
CLDN3O15551 DEFB108A-201ENST00000530110 222 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 AP002770.2-201ENST00000543613 532 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.59□□□□□ -1.99
CLDN3O15551 AC024619.4-201ENST00000580924 316 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 AL356280.1-201ENST00000603614 379 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 AC007938.3-201ENST00000604965 623 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 AL607023.1-201ENST00000620045 248 ntBASIC2.59□□□□□ -1.99
CLDN3O15551 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CLDN3O15551 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDN3O15551 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CLDN3O15551 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
CLDN3O15551 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.58□□□□□ -2
CLDN3O15551 UBE2L2-201ENST00000254302 429 ntBASIC2.58□□□□□ -2
CLDN3O15551 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
CLDN3O15551 RNU6-931P-201ENST00000363850 107 ntBASIC2.58□□□□□ -2
CLDN3O15551 RNU5A-8P-201ENST00000364102 114 ntBASIC2.58□□□□□ -2
CLDN3O15551 RNU6-512P-201ENST00000364438 103 ntBASIC2.58□□□□□ -2
CLDN3O15551 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.58□□□□□ -2
CLDN3O15551 RNU1-138P-201ENST00000384093 164 ntBASIC2.58□□□□□ -2
CLDN3O15551 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.58□□□□□ -2
CLDN3O15551 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.58□□□□□ -2
CLDN3O15551 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.58□□□□□ -2
CLDN3O15551 AC104651.1-201ENST00000427559 735 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms