Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC091834.1-201ENST00000614543 472 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.33□□□□□ -1.88
ATP2A1O14983 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ATP2A1O14983 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ATP2A1O14983 AC090740.1-201ENST00000623193 2262 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ATP2A1O14983 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.32□□□□□ -1.88
ATP2A1O14983 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ATP2A1O14983 MAPK10-362ENST00000641864 4484 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ATP2A1O14983 SNORA20.2-201ENST00000383922 131 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 RNU1-101P-201ENST00000391171 127 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 NDUFB4P7-201ENST00000423198 363 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 AC007283.2-201ENST00000424739 197 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.32□□□□□ -1.88
ATP2A1O14983 AL356867.1-201ENST00000429623 299 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 USP9YP14-201ENST00000430663 563 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.32□□□□□ -1.88
ATP2A1O14983 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.32□□□□□ -1.88
ATP2A1O14983 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.32□□□□□ -1.88
ATP2A1O14983 MTND2P24-201ENST00000453434 806 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.32□□□□□ -1.88
ATP2A1O14983 AL049714.1-201ENST00000466686 347 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 RBM43P1-201ENST00000476891 1081 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 AL049874.1-201ENST00000489560 388 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.32□□□□□ -1.88
ATP2A1O14983 RNU6-390P-201ENST00000516259 103 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 RNU2-10P-201ENST00000516375 211 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 SCARNA15.2-201ENST00000516409 127 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 RNU6-711P-201ENST00000517255 106 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.32□□□□□ -1.88
ATP2A1O14983 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ATP2A1O14983 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.32□□□□□ -1.88
ATP2A1O14983 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.32□□□□□ -1.88
ATP2A1O14983 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.32□□□□□ -1.88
ATP2A1O14983 AC128657.1-201ENST00000549459 145 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.32□□□□□ -1.88
ATP2A1O14983 MTCO3P24-201ENST00000572729 782 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.32□□□□□ -1.88
ATP2A1O14983 AC004223.2-201ENST00000590309 544 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 AC073648.5-201ENST00000603502 305 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 AL136363.2-201ENST00000604173 851 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 AL161729.4-201ENST00000604650 476 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 Z99129.1-201ENST00000612510 255 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.32□□□□□ -1.88
ATP2A1O14983 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.32□□□□□ -1.88
ATP2A1O14983 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ATP2A1O14983 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATP2A1O14983 AC008568.2-201ENST00000623862 2313 ntBASIC3.32□□□□□ -1.88
ATP2A1O14983 AC110774.1-201ENST00000623567 2018 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 OR4G2P-202ENST00000641004 1759 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATP2A1O14983 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATP2A1O14983 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATP2A1O14983 HSPE1P11-201ENST00000339579 310 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 Y_RNA.582-201ENST00000391023 95 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 RPL21P3-201ENST00000395517 478 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATP2A1O14983 RNU2-66P-201ENST00000410650 161 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 AC245054.2-201ENST00000415639 319 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.31□□□□□ -1.88
ATP2A1O14983 PIGFP2-201ENST00000421400 651 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 HSPE1P1-201ENST00000421494 318 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 RPL7P46-201ENST00000425129 740 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP2A1O14983 AC087499.2-201ENST00000432861 149 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 UQCRHP3-201ENST00000451503 251 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 NIPA2P5-201ENST00000452282 464 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP2A1O14983 SNORD97-201ENST00000459187 142 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 RPS20P20-201ENST00000460498 340 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 AC146507.2-201ENST00000460608 476 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 RPS23P3-201ENST00000470993 430 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 AC138853.1-201ENST00000503549 823 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.31□□□□□ -1.88
ATP2A1O14983 AC117522.3-201ENST00000507974 584 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 SNORD59.2-201ENST00000516873 68 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 AC022616.3-201ENST00000523940 148 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.31□□□□□ -1.88
ATP2A1O14983 AC027807.1-201ENST00000559921 996 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 MIR4319-201ENST00000577285 85 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 MIR3167-201ENST00000579623 85 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP2A1O14983 AC068790.2-201ENST00000602601 557 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 AC078795.2-201ENST00000602835 1252 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 AL161734.1-201ENST00000609720 557 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATP2A1O14983 AC099842.1-201ENST00000619919 596 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.31□□□□□ -1.88
ATP2A1O14983 FRG1KP-201ENST00000623592 341 ntBASIC3.31□□□□□ -1.88
ATP2A1O14983 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATP2A1O14983 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
ATP2A1O14983 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP2A1O14983 RNY1P12-201ENST00000364251 105 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 MIR493-201ENST00000385254 89 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 AL360182.1-201ENST00000397433 468 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 U3.42-201ENST00000408746 214 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.3□□□□□ -1.88
ATP2A1O14983 BX295541.1-201ENST00000417774 250 ntBASIC3.3□□□□□ -1.88
ATP2A1O14983 AC063976.3-201ENST00000426849 329 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms