Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 TRBV1-201ENST00000476502 284 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.41□□□□□ -2.18
SDCBPO00560 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.41□□□□□ -2.18
SDCBPO00560 LTV1P1-201ENST00000510683 1237 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.41□□□□□ -2.18
SDCBPO00560 SCARNA3-201ENST00000517097 143 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 RNU2-19P-201ENST00000517288 84 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 CBX3P7-201ENST00000532876 502 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.41□□□□□ -2.18
SDCBPO00560 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.41□□□□□ -2.18
SDCBPO00560 AL359212.1-201ENST00000556608 614 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 AC007349.4-201ENST00000608114 532 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 AC020658.4-201ENST00000613987 684 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 AC120349.2-201ENST00000625002 298 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 AC025048.6-202ENST00000627667 438 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 AC087821.2-201ENST00000637086 450 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 AL163152.1-201ENST00000642001 374 ntBASIC1.41□□□□□ -2.18
SDCBPO00560 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SDCBPO00560 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
SDCBPO00560 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
SDCBPO00560 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.4□□□□□ -2.19
SDCBPO00560 RNU6-1083P-201ENST00000384022 107 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 RPS20P15-201ENST00000412792 311 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.4□□□□□ -2.19
SDCBPO00560 PGBD4P6-201ENST00000421501 610 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 MTCO2P1-201ENST00000424648 477 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 SKA2P1-201ENST00000425592 390 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 SEPT7P5-201ENST00000434048 306 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.4□□□□□ -2.19
SDCBPO00560 IFNA20P-201ENST00000436840 528 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 USP9YP22-201ENST00000438971 294 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.4□□□□□ -2.19
SDCBPO00560 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.4□□□□□ -2.19
SDCBPO00560 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.4□□□□□ -2.19
SDCBPO00560 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.4□□□□□ -2.19
SDCBPO00560 PMCHL2-203ENST00000457791 237 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 RPL7P18-201ENST00000478965 734 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 RPS27AP10-201ENST00000496103 208 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 MRPS17P9-201ENST00000511924 393 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.4□□□□□ -2.19
SDCBPO00560 RNU6-362P-201ENST00000516736 90 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.4□□□□□ -2.19
SDCBPO00560 AC022861.1-201ENST00000522981 663 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 AP001189.2-201ENST00000527320 189 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.4□□□□□ -2.19
SDCBPO00560 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.4□□□□□ -2.19
SDCBPO00560 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.4□□□□□ -2.19
SDCBPO00560 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.4□□□□□ -2.19
SDCBPO00560 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.4□□□□□ -2.19
SDCBPO00560 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.4□□□□□ -2.19
SDCBPO00560 AC068944.2-201ENST00000610373 403 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
SDCBPO00560 AL157770.1-201ENST00000623049 439 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.4□□□□□ -2.19
SDCBPO00560 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.4□□□□□ -2.19
SDCBPO00560 AC010889.1-201ENST00000566193 2666 ntBASIC1.4□□□□□ -2.19
SDCBPO00560 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SDCBPO00560 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.39□□□□□ -2.19
SDCBPO00560 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SDCBPO00560 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SDCBPO00560 Y_RNA.234-201ENST00000364409 97 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SDCBPO00560 Z98749.2-208ENST00000381646 500 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SDCBPO00560 MIR888-201ENST00000401186 77 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.39□□□□□ -2.19
SDCBPO00560 AC003685.2-201ENST00000422795 395 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 AC092634.2-201ENST00000428146 1010 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.39□□□□□ -2.19
SDCBPO00560 RPL7P12-201ENST00000446719 750 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 AC244505.3-201ENST00000454598 187 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.39□□□□□ -2.19
SDCBPO00560 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.39□□□□□ -2.19
SDCBPO00560 SNORD121B-201ENST00000458838 81 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 RPS20P20-201ENST00000460498 340 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 RPS20P22-201ENST00000473700 357 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.39□□□□□ -2.19
SDCBPO00560 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.39□□□□□ -2.19
SDCBPO00560 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
SDCBPO00560 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.39□□□□□ -2.19
SDCBPO00560 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.39□□□□□ -2.19
SDCBPO00560 CYCSP2-201ENST00000558168 301 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SDCBPO00560 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SDCBPO00560 AC007229.1-201ENST00000590455 412 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 AL035411.2-201ENST00000604022 421 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 AL583856.2-201ENST00000606298 543 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 MIR502-201ENST00000606349 86 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.39□□□□□ -2.19
SDCBPO00560 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.39□□□□□ -2.19
SDCBPO00560 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SDCBPO00560 MTCO1P9-201ENST00000505577 1534 ntBASIC1.39□□□□□ -2.19
SDCBPO00560 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.39□□□□□ -2.19
SDCBPO00560 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
SDCBPO00560 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.38□□□□□ -2.19
SDCBPO00560 RNU6-28P-201ENST00000362378 107 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 SNORA23-201ENST00000365128 182 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SDCBPO00560 U8.13-201ENST00000390842 128 ntBASIC1.38□□□□□ -2.19
SDCBPO00560 RPL30P4-201ENST00000429309 333 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms