Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SNORD116-9-201ENST00000384000 95 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 SNORD116-3-201ENST00000384287 95 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 SNORD116-7-201ENST00000384404 95 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 SNORD116-5-201ENST00000384462 95 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 SNORD67-201ENST00000390833 111 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 GPM6BP2-201ENST00000432046 144 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 SNRPEP9-201ENST00000436794 238 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 HMGB3P12-201ENST00000438745 556 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AL714022.1-201ENST00000439897 151 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 GPM6BP1-201ENST00000446387 144 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 MTND1P27-201ENST00000451117 902 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 RPL31P3-201ENST00000458430 332 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 RNU6-956P-201ENST00000458868 103 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AC096576.1-201ENST00000489014 359 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AC093534.1-201ENST00000504977 132 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 RNU1-143P-201ENST00000516296 146 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 SNORA18.6-201ENST00000516792 115 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 SNORA31.21-201ENST00000517180 77 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AC104763.2-201ENST00000604179 382 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AL451064.1-201ENST00000607718 471 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AC093732.2-201ENST00000607950 274 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AL161734.1-201ENST00000609720 557 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 U1.23-201ENST00000610293 146 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 RNU1-68P-201ENST00000615382 146 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 U1.39-201ENST00000621562 146 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AC007998.5-201ENST00000622938 237 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 PISRT1-201ENST00000626175 531 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 MIR622-201ENST00000638396 96 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 MTND5P29-201ENST00000458676 1807 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 HSPE1P11-201ENST00000339579 310 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 MIR22-201ENST00000362190 85 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 RNU6-1027P-201ENST00000383998 107 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 OR2AS1P-201ENST00000427827 319 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC104332.2-201ENST00000429959 156 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC009961.2-201ENST00000435771 251 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC125238.1-201ENST00000448842 249 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC092798.1-201ENST00000458542 409 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 RPS29P20-201ENST00000489592 171 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 Vault.3-201ENST00000516676 95 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 RNU6-56P-201ENST00000516986 93 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 RNU6-1220P-201ENST00000517126 108 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 RNA5SP165-201ENST00000517142 115 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC022616.3-201ENST00000523940 148 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 MIR3167-201ENST00000579623 85 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC015871.2-201ENST00000603605 948 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AL358072.1-201ENST00000604156 575 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC090578.1-201ENST00000604955 591 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AP002360.4-201ENST00000606980 481 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 AC135507.1-201ENST00000607214 561 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 MIR7106-201ENST00000612419 65 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
NPIPA3F8WFD2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.78□□□□□ -1.97
NPIPA3F8WFD2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
NPIPA3F8WFD2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 AC091564.4-201ENST00000533934 2194 ntBASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 FARSBP1-201ENST00000435808 1778 ntBASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 OR5J1P-201ENST00000313544 939 ntBASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 SNORA80A-201ENST00000363922 136 ntBASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 RNU6-960P-201ENST00000364056 120 ntBASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 RNU6-946P-201ENST00000383878 107 ntBASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 RN7SKP220-201ENST00000410611 288 ntBASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 BX295541.1-201ENST00000417774 250 ntBASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.77□□□□□ -1.97
NPIPA3F8WFD2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms