Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AL355143.1-201ENST00000407101 841 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 RNU6-712P-201ENST00000410558 100 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AL449283.1-202ENST00000418249 604 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AC027644.1-201ENST00000419595 298 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AC234781.2-201ENST00000426370 994 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AL035410.1-201ENST00000427409 427 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AC004022.1-201ENST00000447766 1066 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 RNU7-59P-201ENST00000459101 61 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AC079395.1-201ENST00000510981 262 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 MTCO2P32-201ENST00000514865 403 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 SNORA31.8-201ENST00000516327 108 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 SYF2P1-201ENST00000550658 413 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AL163153.1-201ENST00000554223 283 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 MTND4LP25-201ENST00000570218 163 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 RNU6-88P-201ENST00000606801 100 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AL158211.2-201ENST00000607282 395 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AL138478.1-201ENST00000612252 832 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 GDI2P1-201ENST00000429312 1336 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 ZNF734P-201ENST00000419494 1534 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 RNU6-1078P-201ENST00000364522 103 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 Y_RNA.493-201ENST00000384422 102 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 RPS3AP37-201ENST00000419176 745 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 RPL39P6-201ENST00000448289 150 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 snoU109.3-201ENST00000459477 145 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AP004371.1-201ENST00000525240 214 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 MTND2P26-201ENST00000528255 1029 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AC125611.2-201ENST00000551907 647 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 HSPE1P3-201ENST00000559254 309 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 AP003476.1-201ENST00000623984 516 ntBASIC1.26□□□□□ -2.21
COL6A6A6NMZ7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 RNA5SP393-201ENST00000363423 117 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 RNU6-1257P-201ENST00000384625 110 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 RNU6-906P-201ENST00000384700 70 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 MIR625-201ENST00000385047 85 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 AC106883.1-201ENST00000418805 562 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 HMGN2P38-201ENST00000423806 265 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 RPL31P54-201ENST00000429803 370 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 RPS23P3-201ENST00000470993 430 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 AC092902.1-201ENST00000486999 259 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 RPL37P25-201ENST00000507308 276 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 RNU6-711P-201ENST00000517255 106 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 AC087854.1-201ENST00000519706 414 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 AL512347.1-201ENST00000566420 503 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 MTCO1P40-201ENST00000574371 625 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 MIR3660-201ENST00000584845 100 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 AC091057.2-201ENST00000602594 792 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 AC091057.3-201ENST00000602684 733 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 AP000238.1-201ENST00000608759 426 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 AC078880.5-201ENST00000617845 421 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 AC010975.3-201ENST00000618727 978 ntBASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
COL6A6A6NMZ7 MIR493-201ENST00000385254 89 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 RNU6-837P-201ENST00000391056 108 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 SSXP10-201ENST00000402595 565 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AC013262.1-201ENST00000426710 252 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 THAP5P1-201ENST00000439089 262 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 RPL21P131-201ENST00000497298 483 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AC118282.2-201ENST00000508739 374 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 RNU6-1095P-201ENST00000516148 108 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 Y_RNA.681-201ENST00000516445 113 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 MTND1P36-201ENST00000522384 936 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 OR10V3P-201ENST00000525712 725 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AP003033.1-201ENST00000527244 415 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 SULT1C2P1-202ENST00000562418 459 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 MTND3P13-201ENST00000574391 343 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 VN1R87P-201ENST00000596706 487 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AC018926.1-201ENST00000616335 435 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AL109620.1-201ENST00000618738 1197 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AC006927.2-201ENST00000639256 389 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 AC080100.1-201ENST00000624239 5356 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 SNRPEP3-201ENST00000338402 276 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 RNU6-792P-201ENST00000363490 107 ntBASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL6A6A6NMZ7 MIR16-1-201ENST00000385271 89 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms