Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AL359757.2-201ENST00000624309 274 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 AC025048.6-202ENST00000627667 438 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 AC233981.2-201ENST00000611524 1614 ntBASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 RNU6-321P-201ENST00000410912 106 ntBASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 HMGN1P14-201ENST00000412459 517 ntBASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 AC108078.2-201ENST00000510750 236 ntBASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 AL133241.1-201ENST00000556832 487 ntBASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 AC022254.1-201ENST00000567857 235 ntBASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 MIR6767-201ENST00000637302 66 ntBASIC0.67□□□□□ -2.3
CPSF4LA6NMK7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AP000776.1-201ENST00000530032 1663 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AC016716.1-201ENST00000265882 708 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 U3.13-201ENST00000364804 214 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 RNU6-748P-201ENST00000384648 107 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 MIR515-2-201ENST00000384883 83 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 MIR515-1-201ENST00000384884 83 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 HMGN2P39-201ENST00000398005 273 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AC099677.1-201ENST00000420575 175 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AC092047.1-201ENST00000424997 240 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AC092634.2-201ENST00000428146 1010 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 NDUFA5P10-201ENST00000432147 357 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AC092393.1-201ENST00000439625 742 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 DYNLT3P2-201ENST00000442517 295 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 MTND1P18-201ENST00000448191 573 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AF131216.2-201ENST00000512316 564 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 RNU5F-8P-201ENST00000515941 111 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 MIR892C-201ENST00000516410 77 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 RNU6-362P-201ENST00000516736 90 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AC008562.1-201ENST00000521763 330 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AC012443.1-201ENST00000605605 231 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AC090132.2-201ENST00000615881 347 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 STMN1P1-201ENST00000617809 440 ntBASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CPSF4LA6NMK7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.65□□□□□ -2.3
CPSF4LA6NMK7 MTCO1P9-201ENST00000505577 1534 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 MIR373-201ENST00000362273 69 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 RNU6-1197P-201ENST00000391183 107 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 AL136372.1-201ENST00000403060 228 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 TATDN1P1-201ENST00000414123 891 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 YWHAZP8-201ENST00000436935 731 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 PIGFP3-201ENST00000441918 722 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 CALM1P1-201ENST00000442082 433 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 AC117454.1-201ENST00000491120 168 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 RNF138P1-201ENST00000502765 546 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 AC034244.1-201ENST00000507687 207 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 MIR4504-201ENST00000577413 92 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 MIR3126-201ENST00000577443 74 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 MIR3199-1-201ENST00000582434 88 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 AC211469.2-201ENST00000605461 205 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 AC108706.1-201ENST00000611053 297 ntBASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.31
CPSF4LA6NMK7 AC018630.2-201ENST00000534866 2403 ntBASIC0.64□□□□□ -2.31
CPSF4LA6NMK7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CPSF4LA6NMK7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.64□□□□□ -2.31
CPSF4LA6NMK7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CPSF4LA6NMK7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.64□□□□□ -2.31
CPSF4LA6NMK7 MTND6P13-201ENST00000443510 523 ntBASIC0.64□□□□□ -2.31
CPSF4LA6NMK7 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.64□□□□□ -2.31
CPSF4LA6NMK7 RPL31P60-201ENST00000478450 367 ntBASIC0.64□□□□□ -2.31
CPSF4LA6NMK7 SUMO2P6-201ENST00000505273 288 ntBASIC0.64□□□□□ -2.31
CPSF4LA6NMK7 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms