Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 ADAM5-202ENST00000399789 1942 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 RNU6-50P-201ENST00000362356 103 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 SNORA60-201ENST00000362396 134 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 RNU6-254P-201ENST00000363377 107 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 AC005326.1-201ENST00000429197 123 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 RPL23AP69-201ENST00000431134 458 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 PPP1R2P5-201ENST00000457256 603 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 RPL30P5-201ENST00000494923 336 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 RNU6-143P-201ENST00000516942 93 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 RNA5SP291-201ENST00000517222 105 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 RNA5SP179-201ENST00000517284 121 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 LRRC37A5P-203ENST00000580181 585 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 AC244505.7-201ENST00000599675 272 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 AC007687.1-201ENST00000602704 304 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 AC006023.1-201ENST00000603944 259 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 AL121757.2-201ENST00000611223 313 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 AL512643.1-201ENST00000635735 524 ntBASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 AC022336.2-201ENST00000568966 2538 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 AL672296.1-201ENST00000427780 2158 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 Y_RNA.135-201ENST00000363439 95 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 SNORA80A-201ENST00000363922 136 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 Y_RNA.480-201ENST00000384364 102 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 HSPE1P26-201ENST00000405341 275 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 U3.42-201ENST00000408746 214 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 SNORA3C-201ENST00000408792 125 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 AC063979.1-201ENST00000415539 377 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 NDUFB4P6-201ENST00000436819 366 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 Z82210.1-201ENST00000440037 231 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 HMGB3P11-201ENST00000440127 604 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 RPL21P13-201ENST00000488305 481 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 AL157871.3-201ENST00000557231 293 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 MIR3942-201ENST00000585264 109 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 AC073539.2-201ENST00000597113 165 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 AC012119.1-201ENST00000603184 222 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 AC104662.1-201ENST00000604448 511 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 YPEL5P2-201ENST00000605553 359 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 AC104237.2-201ENST00000612456 443 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 FAM157A-202ENST00000615155 405 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 RMST_7.1-201ENST00000621935 268 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 AL133216.2-202ENST00000634512 349 ntBASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC85CA6NKD9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 ZNF807-201ENST00000328088 1707 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 AC007685.1-201ENST00000329806 452 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 RNU4-79P-201ENST00000362764 141 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 Y_RNA.245-201ENST00000364493 95 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 DEFB109C-201ENST00000382575 264 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 DEFB109B-201ENST00000382656 264 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 MIR578-201ENST00000384828 96 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 RN7SKP16-201ENST00000410180 299 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 RNA5SP129-201ENST00000410276 118 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 RPS20P15-201ENST00000412792 311 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 BTF3L4P3-201ENST00000418879 476 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms