Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
COMMD3-BMI1R4GMX3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
COMMD3-BMI1R4GMX3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 Y_RNA.311-201ENST00000365068 96 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AL445529.1-201ENST00000398713 389 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AL136310.1-201ENST00000404926 654 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 U6atac.2-201ENST00000408644 118 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AL953862.1-201ENST00000423016 168 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 RPS3AP44-201ENST00000425466 790 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AC063976.3-201ENST00000426849 329 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 SNRPEP9-201ENST00000436794 238 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AC096571.1-202ENST00000506634 735 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AC079395.1-201ENST00000510981 262 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 RNY4P37-201ENST00000516225 96 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 MIR514B-201ENST00000516774 80 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 RNA5SP364-201ENST00000516938 78 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 RNA5SP290-201ENST00000517133 127 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AC118273.2-201ENST00000532092 465 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 CYCSP2-201ENST00000558168 301 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 MIR4765-201ENST00000585007 77 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AC007229.1-201ENST00000590455 412 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AL139344.1-201ENST00000605228 195 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 OR2AS2P-201ENST00000606902 342 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 PISRT1-201ENST00000626175 531 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AL359851.1-201ENST00000569460 4997 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AC099786.3-201ENST00000565735 1410 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 AC069528.2-201ENST00000624849 1991 ntBASIC2.16□□□□□ -2.06
COMMD3-BMI1R4GMX3 KPNA2P1-201ENST00000458289 1591 ntBASIC2.15□□□□□ -2.06
COMMD3-BMI1R4GMX3 HSPA8P4-201ENST00000511877 1920 ntBASIC2.15□□□□□ -2.06
COMMD3-BMI1R4GMX3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
COMMD3-BMI1R4GMX3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 Y_RNA.500-201ENST00000384466 111 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 SNORD116-12-201ENST00000384468 92 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNU1-148P-201ENST00000384472 162 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNU6-114P-201ENST00000384704 105 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 MIR518C-201ENST00000384822 101 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL590084.2-201ENST00000401481 382 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL356421.1-201ENST00000403255 413 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 TXNP7-201ENST00000406296 293 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 RPL30P4-201ENST00000429309 333 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 FCF1P1-201ENST00000432690 571 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 UBE2D3P1-201ENST00000436669 444 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 MTND5P14-201ENST00000441481 1267 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 MTCO1P53-201ENST00000441633 699 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC026801.1-201ENST00000497178 464 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC008837.2-201ENST00000513076 418 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 RNU6-150P-201ENST00000516237 95 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 SNORD19.2-201ENST00000516978 73 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC091163.3-201ENST00000518269 1144 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AP003497.1-201ENST00000528472 562 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 MIR4513-201ENST00000581077 86 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 U4atac.1-201ENST00000618345 95 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL158163.2-201ENST00000619110 700 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL162373.1-201ENST00000620433 407 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 U4.3-201ENST00000621047 82 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AP003400.5-201ENST00000624827 617 ntBASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.15□□□□□ -2.07
COMMD3-BMI1R4GMX3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC062016.1-201ENST00000355719 319 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 SNORA46.1-201ENST00000391069 153 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 MIR1284-201ENST00000408337 120 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 RPL23AP76-201ENST00000441860 458 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 MTND1P16-201ENST00000465177 898 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 AC055731.1-201ENST00000474387 401 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 LINC00888-204ENST00000487386 421 ntBASIC2.14□□□□□ -2.07
COMMD3-BMI1R4GMX3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms