Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
COX11Q9Y6N1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
COX11Q9Y6N1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
COX11Q9Y6N1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
COX11Q9Y6N1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.4□□□□□ -1.86
COX11Q9Y6N1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
COX11Q9Y6N1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
COX11Q9Y6N1 SNORA74A-201ENST00000364089 198 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 Y_RNA.276-201ENST00000364732 109 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AC110754.1-201ENST00000399740 601 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 HSPE1P8-201ENST00000406997 288 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 RNU6-174P-201ENST00000410406 106 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 RNA5SP306-201ENST00000411087 107 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 RPL23AP26-201ENST00000412728 464 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 BX842559.1-201ENST00000419615 532 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AL590135.1-201ENST00000422215 156 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 PIGPP3-201ENST00000425307 415 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 RPS17P8-201ENST00000434525 335 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 RPL23AP33-201ENST00000442301 452 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 IFNWP4-201ENST00000453148 294 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 RPL21P41-201ENST00000459863 264 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AC110792.1-201ENST00000491826 472 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 MTND3P25-201ENST00000509243 135 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 SNORA70.14-201ENST00000516205 110 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 RNU6-352P-201ENST00000516908 107 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 RNU6-897P-201ENST00000517135 105 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 MIR4273-201ENST00000582824 84 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AC174048.1-201ENST00000603389 144 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AC064801.1-201ENST00000612025 407 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 MIR1244-1-201ENST00000612829 85 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AC019206.1-201ENST00000621938 425 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 AL136164.3-201ENST00000624429 3978 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 MIR1244-3-201ENST00000635744 85 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 MIR1244-2-201ENST00000636449 85 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 MIR1244-4-202ENST00000636813 85 ntBASIC3.4□□□□□ -1.87
COX11Q9Y6N1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COX11Q9Y6N1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 SNURFL-201ENST00000309296 343 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 RPL23P2-201ENST00000320371 421 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 RNY1P16-201ENST00000363063 111 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 SNORD27-201ENST00000363981 72 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 RNU6-200P-201ENST00000364743 107 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AL080315.1-201ENST00000406055 466 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 RNU4-78P-201ENST00000410940 126 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AL159169.1-201ENST00000421119 127 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 RPL7P2-201ENST00000427639 268 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 FTH1P6-201ENST00000430768 320 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 PTMAP6-201ENST00000439110 327 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 RPS3AP46-201ENST00000448352 682 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 PRELID3BP1-201ENST00000457142 540 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 PPIAP15-201ENST00000479662 484 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 RN7SL97P-201ENST00000486780 299 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AC069499.1-201ENST00000489433 509 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 RPL7P23-201ENST00000493874 747 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AC008897.1-201ENST00000494006 347 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 RN7SL652P-201ENST00000577769 300 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.39□□□□□ -1.87
COX11Q9Y6N1 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AL160281.1-201ENST00000605307 311 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 MIR15A-201ENST00000607334 83 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AL450472.3-201ENST00000615578 367 ntBASIC3.39□□□□□ -1.87
COX11Q9Y6N1 AL138825.1-201ENST00000618587 192 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms