Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 AL161912.2-201ENST00000565707 3007 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 BTF3P7-201ENST00000407097 488 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 RAB9AP3-201ENST00000412737 573 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 AL139247.1-201ENST00000422768 325 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 ATP5JP1-201ENST00000431631 322 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 RAB9AP1-201ENST00000449393 573 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 AL118520.1-201ENST00000450770 291 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 AL133162.1-201ENST00000463228 453 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 TRBV12-2-201ENST00000489763 344 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 HIF1AP1-201ENST00000553642 175 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 BNIP3P30-201ENST00000601184 574 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 MIR8058-201ENST00000615737 89 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 YWHAEP7-203ENST00000622054 312 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 FER-210ENST00000628534 558 ntTSL 5 BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 MTND4P35-201ENST00000604257 1375 ntBASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A3BPQ9Y5P4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU6-884P-201ENST00000363889 107 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 Y_RNA.453-201ENST00000384223 109 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU6-198P-201ENST00000384258 104 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 SNORD115-47-201ENST00000391226 86 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU6-1025P-201ENST00000410629 104 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 HMGB1P9-201ENST00000429856 646 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 NEK4P1-201ENST00000433383 879 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 GOT2P5-201ENST00000433995 546 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 RN7SL93P-201ENST00000463035 293 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AL121769.1-201ENST00000469473 401 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AC026801.1-201ENST00000497178 464 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 RAC1P2-201ENST00000511164 579 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 LRRC34P2-201ENST00000514850 553 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 RNU6-718P-201ENST00000516166 105 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AC007991.1-201ENST00000522680 631 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AC020914.4-201ENST00000597690 277 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 BRDTP1-201ENST00000605735 677 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 SNORA62.6-201ENST00000606322 83 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AC004852.3-201ENST00000614131 326 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 SNORD39.4-201ENST00000620099 78 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AC079684.1-201ENST00000621405 437 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AL357559.1-201ENST00000622228 274 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AL160394.1-201ENST00000624765 724 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 MIR3688-2-201ENST00000636963 87 ntBASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.2□□□□□ -1.74
COL4A3BPQ9Y5P4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 AL606923.1-201ENST00000406616 190 ntBASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 RN7SKP285-201ENST00000410137 318 ntBASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 NDUFS5P4-201ENST00000412983 318 ntBASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 RPL26P9-201ENST00000457466 433 ntBASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 RPL21P41-201ENST00000459863 264 ntBASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 AP002884.2-201ENST00000471647 395 ntBASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 AC104136.1-201ENST00000512969 394 ntBASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 RNA5SP208-201ENST00000516156 78 ntBASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 NARSP2-201ENST00000518524 679 ntBASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 AL137161.1-201ENST00000532231 390 ntBASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 AC106782.4-201ENST00000568264 210 ntBASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 MIR5187-201ENST00000583479 76 ntBASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A3BPQ9Y5P4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms