Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC026333.2-201ENST00000542164 106 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC125611.2-201ENST00000551907 647 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC078814.3-201ENST00000553036 491 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 SCOCP1-201ENST00000554676 349 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC037471.2-201ENST00000564941 598 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 OR4K8P-201ENST00000578842 1048 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AL050343.2-201ENST00000607338 280 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC002550.2-201ENST00000621246 394 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 PLCE1P1-201ENST00000622094 305 ntBASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGB1Q9Y5G3 AC007823.1-201ENST00000569932 1566 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 RNA5SP119-201ENST00000362715 117 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 Y_RNA.58-201ENST00000362807 102 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 Y_RNA.154-201ENST00000363624 102 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 Y_RNA.184-201ENST00000363884 108 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 RNY1P12-201ENST00000364251 105 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 RNY3P1-201ENST00000365085 102 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU6-996P-201ENST00000365438 107 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 RNY3-201ENST00000365484 102 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU6-116P-201ENST00000384042 109 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 SNORA9-201ENST00000384215 133 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 Y_RNA.490-201ENST00000384413 102 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 RAB9AP3-201ENST00000412737 573 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 RPS20P15-201ENST00000412792 311 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 BX323014.1-201ENST00000412876 237 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AL354751.2-201ENST00000415471 210 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 MTCO3P46-201ENST00000425787 232 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AC079781.2-201ENST00000446424 169 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 RAB9AP1-201ENST00000449393 573 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 HMGB1P25-201ENST00000468402 607 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 SNORD60.2-201ENST00000516883 86 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 MIR2276-201ENST00000516886 89 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 RNA5SP380-201ENST00000517190 98 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AC022695.1-201ENST00000522089 237 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AP005435.4-201ENST00000529514 284 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 SETP2-201ENST00000553886 926 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AC107294.3-201ENST00000609211 526 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AL354798.1-201ENST00000622505 329 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AC040168.1-201ENST00000623594 991 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 OR4G1P-203ENST00000641984 1631 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AC110774.1-201ENST00000623567 2018 ntBASIC3.29□□□□□ -1.88
PCDHGB1Q9Y5G3 AC007496.3-201ENST00000624987 3443 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 ASNSP3-201ENST00000451989 1306 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 SNORD51-201ENST00000384320 80 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 MIR558-201ENST00000384920 94 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 MIR514A2-201ENST00000385131 88 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 MIR514A3-201ENST00000385132 88 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 SNORA3.3-201ENST00000408712 125 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AL645937.1-202ENST00000421799 937 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 UBE2V1P13-201ENST00000436983 439 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC010655.1-201ENST00000449336 292 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AL049714.1-201ENST00000466686 347 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 GMFBP1-201ENST00000467831 427 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC006512.1-201ENST00000468816 291 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AL163973.1-201ENST00000484753 577 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 RPL38P4-201ENST00000502376 214 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC103851.1-201ENST00000506833 274 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 AC114797.1-201ENST00000514003 728 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 SNORA74D-201ENST00000516404 141 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 RN7SKP219-201ENST00000516825 296 ntBASIC3.28□□□□□ -1.88
PCDHGB1Q9Y5G3 RNU6-798P-201ENST00000516912 103 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms