Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TXNP7-201ENST00000406296 293 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AC099548.1-201ENST00000421443 426 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AC092047.1-201ENST00000424997 240 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 FTH1P25-201ENST00000447665 469 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 RNU7-95P-201ENST00000459222 64 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 RPL31P60-201ENST00000478450 367 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AC147055.4-201ENST00000504399 745 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 RNA5SP137-201ENST00000516833 135 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 SCARNA3-201ENST00000517097 143 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AC084364.2-201ENST00000546924 395 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 POLR2KP1-201ENST00000553226 168 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 MTCYBP27-201ENST00000555160 670 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AC025918.2-201ENST00000558683 763 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AC022254.1-201ENST00000567857 235 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AP000254.1-201ENST00000609934 520 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AC093838.1-201ENST00000613014 469 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 uc_338.12-201ENST00000616344 181 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AL445493.3-201ENST00000619568 477 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 AC091895.1-201ENST00000624494 256 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 MIR7157-201ENST00000635801 60 ntBASIC0.76□□□□□ -2.29
UBE2D4Q9Y2X8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 RNU1-57P-201ENST00000384491 166 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 SNORA17.3-201ENST00000391159 129 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 SSXP10-201ENST00000402595 565 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 Y_RNA.638-201ENST00000459374 113 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 AC080013.2-201ENST00000460866 323 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 RNU6-1053P-201ENST00000515930 101 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 AC107953.1-201ENST00000522216 297 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 AC074051.3-201ENST00000570238 358 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 BNIP3P10-201ENST00000605360 577 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 AC021646.1-201ENST00000605469 484 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 AC103810.9-201ENST00000606688 112 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 FRG1HP-204ENST00000617940 757 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 AC092192.1-201ENST00000633154 1018 ntBASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
UBE2D4Q9Y2X8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 RNU6-1155P-201ENST00000363554 107 ntBASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 Y_RNA.327-201ENST00000365201 102 ntBASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 RNU6-1083P-201ENST00000384022 107 ntBASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 RPL23AP29-201ENST00000397284 453 ntBASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 RPL36P19-201ENST00000430744 301 ntBASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 AL589880.1-201ENST00000448271 287 ntBASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 MTND2P19-201ENST00000449129 1012 ntBASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 IMMP1LP2-201ENST00000552954 492 ntBASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 AC005021.1-201ENST00000608730 355 ntBASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 AL590410.1-201ENST00000617925 333 ntBASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 AC007785.2-201ENST00000598627 1916 ntBASIC0.74□□□□□ -2.29
UBE2D4Q9Y2X8 MFSD8-213ENST00000641134 1327 ntBASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 MIR618-201ENST00000385287 98 ntBASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 AP1B1P2-201ENST00000416196 106 ntBASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 AL590233.1-201ENST00000430017 456 ntBASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 YWHAZP8-201ENST00000436935 731 ntBASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 AC023512.1-201ENST00000444513 499 ntBASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 RPL30P12-201ENST00000474666 353 ntBASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 RPS27P23-201ENST00000487608 251 ntBASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 AC093852.1-201ENST00000503587 266 ntBASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 TRMT112P2-201ENST00000512910 132 ntBASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 RNU6-798P-201ENST00000516912 103 ntBASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 AC018638.7-201ENST00000605836 1114 ntBASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
UBE2D4Q9Y2X8 AC092140.2-201ENST00000618027 521 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms