Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC078974.1-201ENST00000411597 223 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 RPL31P12-201ENST00000422587 358 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 FABP5P14-201ENST00000437273 393 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC002553.2-201ENST00000453217 340 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 RPL21P71-201ENST00000465598 459 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 RNY3P15-201ENST00000516297 97 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 RNU6-1004P-201ENST00000516584 111 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 IGKV2-38-201ENST00000517443 247 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC022616.3-201ENST00000523940 148 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 SUB1P1-201ENST00000524415 382 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC123904.2-201ENST00000548059 300 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 MIR3942-201ENST00000585264 109 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC018889.1-201ENST00000605372 397 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.252-201ENST00000364556 101 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.396-201ENST00000383949 103 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 RNU6-1013P-201ENST00000384180 107 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 RNU6-769P-201ENST00000384407 104 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AL445529.1-201ENST00000398713 389 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 MTHFD2P2-201ENST00000407725 247 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 GSTM3P2-201ENST00000412746 530 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 TPMTP2-201ENST00000414372 726 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 SKA2P1-201ENST00000425592 390 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 RPL23AP50-201ENST00000434149 455 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AL357552.1-201ENST00000445254 415 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AL392103.1-201ENST00000447000 198 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 MTND1P17-201ENST00000448961 204 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AL356010.1-201ENST00000456364 102 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC126389.1-201ENST00000477436 290 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC092451.1-201ENST00000480211 153 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC083904.1-201ENST00000487828 231 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC004062.1-201ENST00000509926 645 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AP003497.1-201ENST00000528472 562 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 BCRP9-201ENST00000605312 388 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 PRR13P7-201ENST00000605538 430 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 AC011266.1-201ENST00000624119 3569 ntBASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NOTCH3Q9UM47 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.2-201ENST00000362330 96 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.373-201ENST00000365600 103 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 SNORD116-23-201ENST00000384645 92 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AL139397.2-201ENST00000404529 772 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC096644.2-201ENST00000429278 159 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 RPL23AP30-201ENST00000432419 501 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 MED28P2-201ENST00000475771 317 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 RPL7P43-201ENST00000478876 753 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 RPL7P20-201ENST00000520308 745 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AL137100.2-201ENST00000555786 315 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC090312.2-201ENST00000582687 378 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC006272.2-201ENST00000594725 163 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 SNORD58B-201ENST00000607313 66 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 BDP1P-201ENST00000582658 1990 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 RHOT1P2-201ENST00000366423 333 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 RNU6-657P-201ENST00000383904 107 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.552-201ENST00000384665 112 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 MIR199A2-201ENST00000385289 110 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 SSXP10-201ENST00000402595 565 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AL139396.1-201ENST00000421137 167 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.654-201ENST00000497848 106 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 HIGD1AP3-201ENST00000515857 278 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms