Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AP001330.5-201ENST00000607176 411 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 AC004696.1-201ENST00000614345 607 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 AC007014.2-201ENST00000615581 479 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 AL356321.1-201ENST00000621360 228 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 MIR3688-2-201ENST00000636963 87 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 DDX10P1-201ENST00000448545 1933 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 HSPE1P11-201ENST00000339579 310 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 Y_RNA.9-201ENST00000362354 101 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 RNA5SP197-201ENST00000363357 119 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 RNU6-1097P-201ENST00000363586 107 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 RPL27AP8-201ENST00000424277 446 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 UBE2D3P2-201ENST00000424409 445 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AL139415.2-201ENST00000431968 163 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AC000111.3-201ENST00000433478 193 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 GAPDHP27-201ENST00000447427 1020 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 MTCO3P38-201ENST00000468910 766 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AC079382.1-201ENST00000493346 557 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 Y_RNA.693-201ENST00000516641 110 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 SNORA31.22-201ENST00000517204 135 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AC100870.1-201ENST00000522035 505 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AC011979.2-201ENST00000527568 352 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AC026333.2-201ENST00000542164 106 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AC123904.3-201ENST00000547218 814 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AL121576.1-201ENST00000556055 276 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 BNIP3P10-201ENST00000605360 577 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AC139792.3-201ENST00000623525 224 ntBASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
HDAC9Q9UKV0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC009812.4-201ENST00000569134 1805 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 RNY4P14-201ENST00000363656 96 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 RNU6-74P-201ENST00000384235 107 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 RPS4XP8-201ENST00000402039 771 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AL391417.1-201ENST00000404100 426 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 RNU2-36P-201ENST00000410361 191 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC063979.1-201ENST00000415539 377 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AL596276.1-201ENST00000434465 418 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 MTCO3P45-201ENST00000443036 613 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 MTATP6P30-201ENST00000443540 664 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 RPL23AP20-201ENST00000447965 421 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 RNU6-1178P-201ENST00000516674 107 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC128657.1-201ENST00000549459 145 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 HIGD1AP1-201ENST00000550979 275 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AL359212.1-201ENST00000556608 614 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 SNORA59B-202ENST00000578183 701 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC012507.3-201ENST00000603556 477 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC025449.1-201ENST00000603896 529 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC007363.1-201ENST00000604736 620 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AL033523.1-201ENST00000605153 153 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC068831.7-201ENST00000616954 363 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC002076.2-201ENST00000617362 122 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 AC093536.2-201ENST00000565257 1406 ntBASIC4.02□□□□□ -1.77
HDAC9Q9UKV0 ZNF826P-207ENST00000622273 1910 ntBASIC4.01□□□□□ -1.77
HDAC9Q9UKV0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms