Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MTCYBP34-201ENST00000439552 670 ntBASIC1.2□□□□□ -2.22
SCN11AQ9UI33 AC118469.1-201ENST00000442943 488 ntBASIC1.2□□□□□ -2.22
SCN11AQ9UI33 SNRPGP6-201ENST00000451124 220 ntBASIC1.2□□□□□ -2.22
SCN11AQ9UI33 AC087884.1-201ENST00000469738 328 ntBASIC1.2□□□□□ -2.22
SCN11AQ9UI33 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.2□□□□□ -2.22
SCN11AQ9UI33 DEFB108E-201ENST00000524692 240 ntBASIC1.2□□□□□ -2.22
SCN11AQ9UI33 Y_RNA.258-201ENST00000364613 105 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AC079780.1-201ENST00000428259 207 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AC096751.1-202ENST00000502691 1067 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AP005639.2-201ENST00000527592 928 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AC074029.2-201ENST00000551045 634 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AL160236.1-201ENST00000556317 195 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 SULT1C2P1-202ENST00000562418 459 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 MIR4698-201ENST00000577795 80 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 MIR5571-201ENST00000577998 113 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 MIR4529-201ENST00000578110 78 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AL590095.2-201ENST00000604136 117 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AC012443.1-201ENST00000605605 231 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.19□□□□□ -2.22
SCN11AQ9UI33 MIR6857-201ENST00000613267 93 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
SCN11AQ9UI33 HNRNPDP2-201ENST00000406475 478 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.19□□□□□ -2.22
SCN11AQ9UI33 RPL7P34-201ENST00000433316 712 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AC005410.1-202ENST00000460347 485 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 SNORA31.20-201ENST00000517111 133 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AC084373.1-201ENST00000603311 235 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 AC018755.4-201ENST00000619715 454 ntBASIC1.19□□□□□ -2.22
SCN11AQ9UI33 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.19□□□□□ -2.22
SCN11AQ9UI33 MIR330-201ENST00000362196 94 ntBASIC1.18□□□□□ -2.22
SCN11AQ9UI33 RNU6-317P-201ENST00000384031 107 ntBASIC1.18□□□□□ -2.22
SCN11AQ9UI33 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SCN11AQ9UI33 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.18□□□□□ -2.22
SCN11AQ9UI33 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.18□□□□□ -2.22
SCN11AQ9UI33 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.18□□□□□ -2.22
SCN11AQ9UI33 RPL31P41-201ENST00000477967 372 ntBASIC1.18□□□□□ -2.22
SCN11AQ9UI33 RPS27P26-201ENST00000494583 239 ntBASIC1.18□□□□□ -2.22
SCN11AQ9UI33 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.18□□□□□ -2.22
SCN11AQ9UI33 AC103833.1-201ENST00000517442 172 ntBASIC1.18□□□□□ -2.22
SCN11AQ9UI33 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.18□□□□□ -2.22
SCN11AQ9UI33 AC135507.1-201ENST00000607214 561 ntBASIC1.18□□□□□ -2.22
SCN11AQ9UI33 AC010487.4-201ENST00000637027 61 ntBASIC1.18□□□□□ -2.22
SCN11AQ9UI33 ZNF702P-202ENST00000434269 1966 ntBASIC1.18□□□□□ -2.22
SCN11AQ9UI33 RNU6-532P-201ENST00000384318 107 ntBASIC1.17□□□□□ -2.22
SCN11AQ9UI33 U8.14-201ENST00000390843 143 ntBASIC1.17□□□□□ -2.22
SCN11AQ9UI33 USP12PX-201ENST00000432383 1057 ntBASIC1.17□□□□□ -2.22
SCN11AQ9UI33 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.17□□□□□ -2.22
SCN11AQ9UI33 MTATP6P7-201ENST00000453315 681 ntBASIC1.17□□□□□ -2.22
SCN11AQ9UI33 AC010099.1-201ENST00000455434 375 ntBASIC1.17□□□□□ -2.22
SCN11AQ9UI33 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.17□□□□□ -2.22
SCN11AQ9UI33 SNORA31.8-201ENST00000516327 108 ntBASIC1.17□□□□□ -2.22
SCN11AQ9UI33 IMMP1LP2-201ENST00000552954 492 ntBASIC1.17□□□□□ -2.22
SCN11AQ9UI33 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.17□□□□□ -2.22
SCN11AQ9UI33 AC025165.5-201ENST00000602802 578 ntBASIC1.17□□□□□ -2.22
SCN11AQ9UI33 AC025588.4-201ENST00000615802 908 ntBASIC1.17□□□□□ -2.22
SCN11AQ9UI33 SNORA23-201ENST00000365128 182 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 MIR147B-201ENST00000390185 80 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 MIR1250-201ENST00000408098 113 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.16□□□□□ -2.22
SCN11AQ9UI33 AC026801.1-201ENST00000497178 464 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.16□□□□□ -2.22
SCN11AQ9UI33 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.16□□□□□ -2.22
SCN11AQ9UI33 AC005034.5-201ENST00000604219 466 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 HSPE1P7-201ENST00000604681 321 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SCN11AQ9UI33 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
SCN11AQ9UI33 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SCN11AQ9UI33 CR848007.1-201ENST00000442354 1699 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SCN11AQ9UI33 RNU6-1331P-201ENST00000363658 106 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 SNORD14B-201ENST00000364533 90 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 SFR1P1-201ENST00000403720 688 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 OR6C66P-201ENST00000414917 930 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SCN11AQ9UI33 EZH2P1-201ENST00000431167 291 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 MTND2P8-201ENST00000450555 1025 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 HSPE1P24-201ENST00000450782 238 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 AC107032.1-201ENST00000485945 480 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 AC091965.2-201ENST00000512324 613 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.16□□□□□ -2.22
SCN11AQ9UI33 Y_RNA.681-201ENST00000516445 113 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.16□□□□□ -2.22
SCN11AQ9UI33 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN11AQ9UI33 PCNAP1-202ENST00000595299 752 ntBASIC1.16□□□□□ -2.22
SCN11AQ9UI33 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.16□□□□□ -2.22
SCN11AQ9UI33 RNU1-105P-201ENST00000363470 161 ntBASIC1.15□□□□□ -2.23
SCN11AQ9UI33 SNORA70.7-201ENST00000384159 133 ntBASIC1.15□□□□□ -2.23
SCN11AQ9UI33 RPL21P90-201ENST00000415692 466 ntBASIC1.15□□□□□ -2.23
SCN11AQ9UI33 AL365496.1-201ENST00000426885 215 ntBASIC1.15□□□□□ -2.23
SCN11AQ9UI33 snoU13.4-201ENST00000458916 104 ntBASIC1.15□□□□□ -2.23
SCN11AQ9UI33 KATNBL1P4-201ENST00000503545 918 ntBASIC1.15□□□□□ -2.23
SCN11AQ9UI33 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.15□□□□□ -2.23
SCN11AQ9UI33 RNU6-970P-201ENST00000516312 107 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms