Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU4-27P-201ENST00000410889 139 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AL158050.1-201ENST00000416077 457 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AL357078.2-201ENST00000416486 427 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AL353689.1-201ENST00000438895 199 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 RPL32P28-201ENST00000443577 397 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AC002381.1-201ENST00000447049 280 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 OFD1P3Y-201ENST00000453312 783 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 PPP1R2P5-201ENST00000457256 603 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 RPS15AP17-201ENST00000470598 390 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AC079203.1-201ENST00000487972 404 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 MIR4299-201ENST00000577899 72 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 MIR4765-201ENST00000585007 77 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AC011451.2-201ENST00000604303 598 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AL158211.4-201ENST00000606988 584 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AC109809.1-201ENST00000619665 545 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 AC084768.2-201ENST00000622736 221 ntBASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.64□□□□□ -2.15
VPS29Q9UBQ0 ZNF702P-202ENST00000434269 1966 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 RNA5SP276-201ENST00000362580 94 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 SUGT1P1-201ENST00000379514 476 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 RNU6-932P-201ENST00000391108 106 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 EDDM3CP-201ENST00000415977 425 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 ZYG11AP1-201ENST00000430329 837 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 GTF2IP7-202ENST00000436677 309 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 RPL7P55-201ENST00000450522 746 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 TRBV1-201ENST00000476502 284 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 AC025181.1-201ENST00000477507 416 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 AC093281.2-201ENST00000510153 597 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 NRON-201ENST00000517270 370 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 MIR3126-201ENST00000577443 74 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 MIR4666A-201ENST00000580160 79 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 AC002545.1-201ENST00000592511 181 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 AP002906.1-201ENST00000603405 233 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 AC005034.5-201ENST00000604219 466 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 AC008555.8-201ENST00000623602 2168 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 AL356473.1-201ENST00000406203 1408 ntBASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
VPS29Q9UBQ0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 RNU6-1159P-201ENST00000362933 107 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 RNU6-549P-201ENST00000384433 107 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 MIR23A-201ENST00000385245 73 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 U8.13-201ENST00000390842 128 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 NDUFS5P4-201ENST00000412983 318 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AC096920.1-201ENST00000423991 241 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 MTCYBP32-201ENST00000427945 1084 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 FABP5P14-201ENST00000437273 393 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AC092393.1-201ENST00000439625 742 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 GXYLT1P1-201ENST00000446657 490 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AL136380.1-201ENST00000447970 162 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 COX6CP18-201ENST00000448769 222 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 RPL23AP3-201ENST00000453844 468 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AC104564.1-201ENST00000493028 407 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AL035411.2-201ENST00000604022 421 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AC005296.1-201ENST00000616145 209 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 MIR3199-2-201ENST00000636243 86 ntBASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
VPS29Q9UBQ0 RNU6-486P-201ENST00000363116 107 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 SNRPEP2-201ENST00000397592 279 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 VN1R51P-201ENST00000411675 945 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms