Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 RNU6-77P-201ENST00000410554 91 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 ZNF863P-201ENST00000426746 417 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 MTND2P21-201ENST00000436242 1042 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 MTND6P13-201ENST00000443510 523 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 AC068587.2-201ENST00000478386 781 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 TRBV12-1-201ENST00000479785 344 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 AL049874.1-201ENST00000489560 388 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 RPS29P21-201ENST00000496272 170 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 AC098862.1-201ENST00000504991 413 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 SNORA25.15-201ENST00000516487 89 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 SNORA31.24-201ENST00000517232 57 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 AC107953.1-201ENST00000522216 297 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 AC024224.1-201ENST00000538284 609 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 YWHAZP1-201ENST00000556286 722 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 AC007151.1-201ENST00000572774 483 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 SNORD53B-201ENST00000577887 78 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 AC009318.2-201ENST00000610917 651 ntBASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.18□□□□□ -2.22
COMMD3Q9UBI1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 MTCO1P23-201ENST00000415223 1526 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 RNU6-203P-201ENST00000384038 104 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 SNORA67.6-201ENST00000391093 99 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 RNU4-26P-201ENST00000410270 107 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 RNU2-41P-201ENST00000410991 178 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 RPS24P7-201ENST00000416921 246 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AC244453.4-201ENST00000419150 388 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AC246680.2-201ENST00000422106 389 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AC018630.2-202ENST00000422992 927 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AC244035.1-201ENST00000430042 390 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 SNORA31.22-201ENST00000517204 135 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 IGJP1-201ENST00000522682 475 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 ARL2BPP5-201ENST00000523141 481 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 HSPA8P13-201ENST00000523715 472 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AC015720.1-201ENST00000565251 277 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AC022254.1-201ENST00000567857 235 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 MIR4713-201ENST00000582691 75 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 BNIP3P25-201ENST00000596023 559 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AC022387.2-201ENST00000604050 448 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AL138963.2-201ENST00000605137 226 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 BX322635.1-201ENST00000605804 496 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AP000238.1-201ENST00000608759 426 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AL121652.1-201ENST00000608851 448 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 FTX_3.1-201ENST00000610451 147 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AC021755.4-201ENST00000616620 456 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 AC008443.7-201ENST00000622195 246 ntBASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
COMMD3Q9UBI1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 SNORD114-1-201ENST00000362705 72 ntBASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 MTCO1P57-201ENST00000432182 261 ntBASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 AL096803.2-201ENST00000450032 677 ntBASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 HMGB1P35-201ENST00000503360 598 ntBASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 MRPS33P3-201ENST00000513456 322 ntBASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 AL359212.1-201ENST00000556608 614 ntBASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 AC233702.2-202ENST00000562547 291 ntBASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 AL031274.2-201ENST00000599419 203 ntBASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 GAS5-AS1-201ENST00000602767 694 ntBASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 AC103810.8-201ENST00000607347 118 ntBASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 AC022202.1-201ENST00000613515 211 ntBASIC1.16□□□□□ -2.22
COMMD3Q9UBI1 AC005832.2-201ENST00000538921 1430 ntBASIC1.15□□□□□ -2.22
COMMD3Q9UBI1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.15□□□□□ -2.22
COMMD3Q9UBI1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 RNA5SP212-201ENST00000391223 107 ntBASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 RNU2-63P-201ENST00000410792 194 ntBASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 UBE2V1P11-201ENST00000411559 285 ntBASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 HMGN2P3-201ENST00000433603 273 ntBASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 HMGN2P5-201ENST00000436882 273 ntBASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 AC009238.1-201ENST00000442165 424 ntBASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 AC009237.6-201ENST00000446969 424 ntBASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 snoZ278.1-201ENST00000517059 112 ntBASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 AP004247.1-201ENST00000531556 1289 ntBASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.15□□□□□ -2.23
COMMD3Q9UBI1 AL138478.1-201ENST00000612252 832 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms