Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-927P-201ENST00000516199 100 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC109329.2-201ENST00000519658 482 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AP001646.1-201ENST00000527936 915 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 DEFB108A-201ENST00000530110 222 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC027807.1-201ENST00000559921 996 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC027176.1-201ENST00000560204 514 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 MIR4435-1-201ENST00000582552 80 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC008751.2-201ENST00000597885 980 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AL355472.4-201ENST00000610233 626 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC090970.3-201ENST00000612566 866 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC079395.3-201ENST00000615161 484 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 CTSLP2-204ENST00000629029 392 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AL139095.1-201ENST00000404326 391 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AL359634.1-202ENST00000404721 284 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AC078974.1-201ENST00000411597 223 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 RPS27AP14-201ENST00000422868 454 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AC244035.1-201ENST00000430042 390 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 RPL36AP6-201ENST00000435770 321 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 MTCO1P42-201ENST00000457379 726 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AC128713.1-201ENST00000471495 306 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 RN7SL297P-201ENST00000483161 293 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 RPL9P33-201ENST00000484311 566 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AC112673.1-201ENST00000513168 575 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 RNU6-64P-201ENST00000517119 105 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AC128657.1-201ENST00000549459 145 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AC090888.1-201ENST00000561335 1141 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 MIR4298-201ENST00000584380 73 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 RPL23AP78-201ENST00000599928 470 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AC136601.2-201ENST00000604356 474 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AC007671.2-201ENST00000637344 619 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 AC010149.2-201ENST00000637608 315 ntBASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.25□□□□□ -2.05
CLCF1Q9UBD9 PABPC1P9-201ENST00000426076 1612 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 RNU6-1284P-201ENST00000363701 100 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 RNU6-301P-201ENST00000384277 107 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 RNA5SP210-201ENST00000391034 120 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 USP9YP13-201ENST00000417797 480 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 MTND5P2-201ENST00000442927 1142 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AC087588.1-201ENST00000462203 316 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AC126182.1-201ENST00000478134 357 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AC116347.2-201ENST00000514912 523 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 RNU6-1003P-201ENST00000517099 105 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 RNA5SP290-201ENST00000517133 127 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AC009094.1-201ENST00000564443 426 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 PCMTD1P2-201ENST00000565017 355 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 KC877982.1-201ENST00000602313 470 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AP000403.1-201ENST00000603349 851 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AC034229.4-201ENST00000607861 441 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 FTX_3.1-201ENST00000610451 147 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AC245517.5-201ENST00000611529 162 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 AP003399.1-201ENST00000637534 361 ntBASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CLCF1Q9UBD9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CLCF1Q9UBD9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLCF1Q9UBD9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CLCF1Q9UBD9 Y_RNA.46-201ENST00000362695 102 ntBASIC2.23□□□□□ -2.05
CLCF1Q9UBD9 Y_RNA.97-201ENST00000363094 102 ntBASIC2.23□□□□□ -2.05
CLCF1Q9UBD9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CLCF1Q9UBD9 MIR767-201ENST00000390228 109 ntBASIC2.23□□□□□ -2.05
CLCF1Q9UBD9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms