Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 Y_RNA.88-201ENST00000363029 99 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 Y_RNA.303-201ENST00000364998 94 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AL109755.1-201ENST00000401791 649 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 RPS3AP24-201ENST00000407896 734 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 MTCO3P12-201ENST00000416718 547 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 TOMM22P1-201ENST00000418578 312 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 SDCBPP3-201ENST00000419629 891 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 OR2AS1P-201ENST00000427827 319 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AL159987.2-201ENST00000432754 307 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 HIGD1AP11-201ENST00000438361 280 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 DPPA3P1-201ENST00000448050 469 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC140076.1-201ENST00000449897 361 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-410P-201ENST00000517006 107 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 HMGB1P41-201ENST00000520234 440 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC011979.2-201ENST00000527568 352 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AL512310.1-201ENST00000548639 172 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC128657.1-201ENST00000549459 145 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AL359212.1-201ENST00000556608 614 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AP005205.1-201ENST00000563503 508 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC105224.1-201ENST00000587055 421 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC008739.3-201ENST00000603262 127 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC007621.1-201ENST00000604544 437 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC019176.2-201ENST00000611579 315 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AL353748.2-201ENST00000622148 471 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 MTND5P19-201ENST00000424872 1794 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 SNORA71.3-201ENST00000362582 128 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-1120P-201ENST00000362988 108 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 RNU1-33P-201ENST00000364249 162 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-1322P-201ENST00000364309 107 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 MIR183-201ENST00000384958 110 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 MIR181B1-201ENST00000385240 110 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-1158P-201ENST00000391167 107 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AL591416.1-201ENST00000404015 867 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 RNU2-43P-201ENST00000410306 190 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 RNU4-65P-201ENST00000410473 140 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 RPL21P24-201ENST00000413752 448 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC099677.1-201ENST00000420575 175 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC093106.2-201ENST00000428212 385 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC097713.2-201ENST00000430199 356 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 RPS20P5-201ENST00000434808 360 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC004866.2-201ENST00000438285 481 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC016696.1-201ENST00000446949 318 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 RN7SL20P-201ENST00000488827 297 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC092185.1-201ENST00000491371 97 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC026427.2-201ENST00000506228 536 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 HMGN1P28-201ENST00000521340 364 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 OR4R1P-201ENST00000529879 463 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 MIR4444-1-201ENST00000581696 74 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 MIR4444-2-201ENST00000584390 74 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AL022099.1-201ENST00000604551 712 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 MIR92B-201ENST00000607575 96 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 TUG1_2.1-201ENST00000614234 87 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AL157817.1-201ENST00000614264 790 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC004696.1-201ENST00000614345 607 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 AC015967.1-201ENST00000619893 476 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 U6.105-201ENST00000637379 88 ntBASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SMARCAL1Q9NZC9 Z83843.1-201ENST00000604070 3685 ntBASIC3.28□□□□□ -1.89
SMARCAL1Q9NZC9 AL079305.1-201ENST00000623159 3008 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-188P-201ENST00000364207 107 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-867P-201ENST00000364956 107 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 Y_RNA.367-201ENST00000365544 101 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-1074P-201ENST00000383995 104 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms