Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CLN6Q9NWW5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.05□□□□□ -2.08
CLN6Q9NWW5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.05□□□□□ -2.08
CLN6Q9NWW5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLN6Q9NWW5 GNG5P1-201ENST00000255500 204 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 RNU4-68P-201ENST00000364314 141 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 MIR196B-201ENST00000384852 84 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 MIR19A-201ENST00000384878 82 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 RN7SKP266-201ENST00000410232 287 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 AC007560.1-201ENST00000426912 237 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 GPM6BP2-201ENST00000432046 144 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 RPL36AP53-201ENST00000432891 316 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 AL117351.1-201ENST00000438864 766 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 GPM6BP1-201ENST00000446387 144 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 ANKRD26P4-201ENST00000455755 950 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 MTND4P1-201ENST00000457501 1466 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 RPS3AP14-201ENST00000483907 780 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 MTCYBP43-201ENST00000513621 740 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 RNU1-40P-201ENST00000516816 164 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 RNU1-97P-201ENST00000516872 164 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 RN7SKP258-201ENST00000517151 304 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 SNORA70.24-201ENST00000517233 118 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 UBTFL10-201ENST00000528532 562 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 AC010186.2-204ENST00000537668 439 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 MRPS36P5-201ENST00000551909 298 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 RPS3AP23-202ENST00000574601 686 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 MIR5571-201ENST00000577998 113 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 MIR5007-201ENST00000583098 95 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 AC008121.1-201ENST00000603244 268 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 AL021997.1-201ENST00000605757 193 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 SNORD14A-201ENST00000606526 91 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 AC103710.1-201ENST00000610003 901 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 DUSP12P1-201ENST00000612874 516 ntBASIC2.04□□□□□ -2.08
CLN6Q9NWW5 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLN6Q9NWW5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 MTND5P33-201ENST00000571250 1450 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AC062016.1-201ENST00000355719 319 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 RNU6-7-201ENST00000364784 107 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 RNU6-8-201ENST00000365467 107 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AL359634.1-202ENST00000404721 284 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AL353729.1-201ENST00000425044 720 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AL451062.2-201ENST00000427515 271 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 RPL7P18-201ENST00000478965 734 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 SCARNA3-201ENST00000517097 143 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 ISCA1P3-201ENST00000577104 373 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 MIR4319-201ENST00000577285 85 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 MIR3167-201ENST00000579623 85 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AC006023.1-201ENST00000603944 259 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AC112220.3-201ENST00000605502 502 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 RNU6-88P-201ENST00000606801 100 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AC010678.1-201ENST00000614118 713 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 AC012640.5-201ENST00000623897 319 ntBASIC2.03□□□□□ -2.08
CLN6Q9NWW5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CLN6Q9NWW5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC092125.1-201ENST00000562568 1995 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 RNA5SP68-201ENST00000363885 119 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 SNORA3A-201ENST00000364113 130 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 SNORA4.1-201ENST00000364263 144 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 RNU6-658P-201ENST00000384606 106 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 SNORA48.2-201ENST00000390926 124 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 VN1R51P-201ENST00000411675 945 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AC236972.1-201ENST00000433225 199 ntBASIC2.02□□□□□ -2.09
CLN6Q9NWW5 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms