Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 FAR2P2-201ENST00000413041 594 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 AC063979.1-201ENST00000415539 377 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 TOMM22P1-201ENST00000418578 312 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 RPL21P66-201ENST00000426566 466 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 AC073587.1-201ENST00000447093 876 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 RN7SL222P-201ENST00000476452 299 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 AC023141.12-201ENST00000512399 199 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 AP005660.1-201ENST00000522972 293 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 HMGB1P40-201ENST00000525121 540 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 RPL10P14-201ENST00000565265 298 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 RPL23AP87-202ENST00000573039 466 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 SNORD91B-202ENST00000608459 222 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 AC100827.5-201ENST00000615883 426 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 AC073349.3-201ENST00000617616 186 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 uc_338.7-201ENST00000621834 124 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 MIR6810-201ENST00000622701 70 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 AC007685.1-201ENST00000329806 452 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 RNA5SP189-201ENST00000364920 115 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 RNU6-514P-201ENST00000384208 107 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 RNU6-651P-201ENST00000411040 105 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 AL358453.1-201ENST00000422522 250 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 AC090774.1-201ENST00000435925 246 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 GAPDHP25-201ENST00000447061 1001 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 SNORD2.1-201ENST00000458762 69 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 RPS27AP13-201ENST00000498403 237 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 MRPS33P2-201ENST00000507850 322 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 RN7SKP276-201ENST00000516242 268 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 AC090617.3-201ENST00000573670 475 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 MIR3691-201ENST00000578066 90 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 AL353748.2-201ENST00000622148 471 ntBASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
CUEDC1Q9NWM3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CUEDC1Q9NWM3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
CUEDC1Q9NWM3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CUEDC1Q9NWM3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.15□□□□□ -1.58
CUEDC1Q9NWM3 HSPA8P15-201ENST00000401676 786 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 AF186996.5-201ENST00000418098 904 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 AL356981.1-201ENST00000454879 684 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 AC091179.1-201ENST00000461606 579 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 AC010326.1-201ENST00000462726 602 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 AP000873.1-201ENST00000463987 400 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 AC114982.1-201ENST00000469402 321 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 RPS4XP1-201ENST00000482189 787 ntBASIC5.15□□□□□ -1.59
CUEDC1Q9NWM3 RN7SL447P-201ENST00000494711 245 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms