Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 ZNF861P-201ENST00000588126 639 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 U73023.1-201ENST00000603134 700 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AC012119.1-201ENST00000603184 222 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AP001981.2-201ENST00000603241 418 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AC136601.2-201ENST00000604356 474 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 RNU6-7-201ENST00000364784 107 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 RNU6-8-201ENST00000365467 107 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 RNY3P13-201ENST00000365542 102 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AC129850.1-201ENST00000436203 508 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 TAF9P1-201ENST00000445421 515 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 TAF9P2-201ENST00000454958 515 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 ELL2P3-201ENST00000457883 1602 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 RN7SL499P-201ENST00000481141 276 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 MIR3118-1-201ENST00000581787 76 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AC112191.3-201ENST00000604371 277 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 NUTF2P8-201ENST00000604593 363 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AL136363.1-201ENST00000605349 337 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 RNU6-87P-201ENST00000607561 108 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AC005046.1-201ENST00000608515 625 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AC073114.1-201ENST00000612027 490 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AC093783.1-201ENST00000612976 329 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AC034102.8-201ENST00000615146 484 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AC073308.1-201ENST00000623696 305 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 SCARNA15.3-201ENST00000626315 122 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 SCARNA4.1-201ENST00000628597 123 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AL137790.1-201ENST00000634283 177 ntBASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMC4Q9NTJ3 AC008669.1-201ENST00000565823 2178 ntBASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 RNU6-511P-201ENST00000363496 107 ntBASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 AL645937.1-202ENST00000421799 937 ntBASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 COTL1P1-201ENST00000422309 375 ntBASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 AC019097.1-201ENST00000424783 735 ntBASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 AL714022.1-201ENST00000439897 151 ntBASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 USP9YP12-201ENST00000450481 570 ntBASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 SNORD97-201ENST00000459187 142 ntBASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 snoU13.28-201ENST00000459235 104 ntBASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 AC116337.2-201ENST00000477662 156 ntBASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 SNORA31.21-201ENST00000517180 77 ntBASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 AC091953.2-201ENST00000623979 160 ntBASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.56□□□□□ -1.84
SMC4Q9NTJ3 AL359693.1-201ENST00000614959 2407 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 RNA5SP139-201ENST00000364340 117 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 RNU6-140P-201ENST00000384566 108 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 FCF1P10-201ENST00000407590 479 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AC099548.1-201ENST00000421443 426 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AL356583.2-201ENST00000426536 280 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 FCF1P1-201ENST00000432690 571 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 RNU7-23P-201ENST00000459465 62 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 MTCO2P29-201ENST00000465212 189 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 ARL4AP2-201ENST00000507378 601 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AP003467.2-201ENST00000520175 319 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AC079600.2-201ENST00000550076 130 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 LARP7P3-201ENST00000579888 337 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AL670379.6-201ENST00000603753 252 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AL670379.11-201ENST00000604059 253 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AC008162.1-201ENST00000604718 254 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AL670379.1-201ENST00000604752 252 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AL670379.5-201ENST00000605253 252 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AL670379.12-201ENST00000605291 253 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AL670379.8-201ENST00000605353 252 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AL670379.7-201ENST00000605823 252 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 Z69908.1-201ENST00000622603 247 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 FRG1KP-201ENST00000623592 341 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AC090617.7-201ENST00000623952 126 ntBASIC3.55□□□□□ -1.84
SMC4Q9NTJ3 AL161431.1-201ENST00000618966 4205 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms