Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL714022.1-201ENST00000439897 151 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 PSPHP1-201ENST00000450062 261 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 ATG12P2-201ENST00000456830 416 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 AC116337.2-201ENST00000477662 156 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 RPL31P41-201ENST00000477967 372 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 AC025165.5-201ENST00000602802 578 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 DUXAP11-201ENST00000603858 526 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 AP005137.2-201ENST00000609238 400 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 DUXAP10-204ENST00000612052 616 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 AC106730.3-201ENST00000624568 641 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 HPVC1-201ENST00000629899 1198 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 RNU6-882P-201ENST00000391025 103 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 PIGFP3-201ENST00000441918 722 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 GTF2IP12-201ENST00000456547 356 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC010186.2-204ENST00000537668 439 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC087465.1-201ENST00000560574 245 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC007151.1-201ENST00000572774 483 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AP001542.2-201ENST00000593141 364 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 RMST_10.1-201ENST00000616309 154 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC040168.1-201ENST00000623594 991 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 U6.101-201ENST00000637707 76 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC016769.3-201ENST00000396562 315 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 RN7SKP51-201ENST00000410781 304 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC004965.1-201ENST00000413033 213 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC234064.1-201ENST00000436312 247 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AL353691.1-201ENST00000451332 387 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 RN7SL274P-201ENST00000492268 272 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC108078.2-201ENST00000510750 236 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC090821.2-201ENST00000523552 176 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AP004607.1-201ENST00000524456 203 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC087441.2-201ENST00000529141 262 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC118273.2-201ENST00000532092 465 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AC073308.1-201ENST00000623696 305 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 AP003400.5-201ENST00000624827 617 ntBASIC1.32□□□□□ -2.2
KIAA1549Q9HCM3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 Y_RNA.238-201ENST00000364441 102 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 RNU6-619P-201ENST00000365146 108 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 U3.20-201ENST00000390909 217 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 THAP5P1-201ENST00000439089 262 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 TAF9P1-201ENST00000445421 515 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 AL050341.1-201ENST00000447743 313 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 NDUFA5P7-201ENST00000452914 242 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 TAF9P2-201ENST00000454958 515 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 AC104229.1-201ENST00000561364 255 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 AC080013.4-201ENST00000607624 649 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 MIR6130-201ENST00000619419 109 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 AC073592.7-201ENST00000623659 507 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 MTCO1P23-201ENST00000415223 1526 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 AC008555.8-201ENST00000623602 2168 ntBASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
KIAA1549Q9HCM3 RNU6-707P-201ENST00000364647 95 ntBASIC1.3□□□□□ -2.2
KIAA1549Q9HCM3 RNU6-234P-201ENST00000365229 104 ntBASIC1.3□□□□□ -2.2
KIAA1549Q9HCM3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
KIAA1549Q9HCM3 AL035405.1-201ENST00000400795 710 ntBASIC1.3□□□□□ -2.2
KIAA1549Q9HCM3 MTND5P8-201ENST00000449817 1083 ntBASIC1.3□□□□□ -2.2
KIAA1549Q9HCM3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.3□□□□□ -2.2
KIAA1549Q9HCM3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.3□□□□□ -2.2
KIAA1549Q9HCM3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms