Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.06□□□□□ -1.76
SALL3Q9BXA9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SALL3Q9BXA9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 RNU6-97P-201ENST00000363387 104 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 RNU6-1243P-201ENST00000364028 107 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 RNA5SP167-201ENST00000365461 116 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 Y_RNA.387-201ENST00000383918 102 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 MIR34B-201ENST00000385076 84 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 SSXP10-201ENST00000402595 565 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 RNU6-193P-201ENST00000410977 107 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 RNU6-1148P-201ENST00000410992 104 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 AC069218.2-201ENST00000411665 344 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 RPS7P15-201ENST00000415804 584 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 MTND2P23-201ENST00000422990 651 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 DUTP6-201ENST00000425573 462 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 PSMA6P3-201ENST00000428242 164 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 TIMM9P1-201ENST00000436122 256 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 HMGB1P18-201ENST00000438801 619 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 RPL23AP33-201ENST00000442301 452 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 RPL29P29-201ENST00000448725 423 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 RPL7P52-201ENST00000449200 742 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 AC073415.1-201ENST00000449240 153 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 AC007547.1-201ENST00000462177 490 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 RPS4XP10-201ENST00000465034 731 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 RPL23AP67-201ENST00000465341 474 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 AP003497.1-201ENST00000528472 562 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 MIR4742-201ENST00000581069 85 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 UBE2L4-201ENST00000587688 464 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 GLUD1P4-201ENST00000590914 418 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 AC096577.2-201ENST00000611455 153 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 AC015967.1-201ENST00000619893 476 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 AC134503.1-201ENST00000633048 54 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 PRO1804-201ENST00000623780 2050 ntBASIC4.05□□□□□ -1.76
SALL3Q9BXA9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
SALL3Q9BXA9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 ELL2P4-201ENST00000446870 1376 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 MTND4P27-201ENST00000450813 1354 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 XIAPP3-201ENST00000312918 795 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 RNU1-75P-201ENST00000347264 129 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 Y_RNA.422-201ENST00000384054 114 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 NDUFB4P4-201ENST00000404822 243 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AC097713.2-201ENST00000430199 356 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 ERLEC1P1-201ENST00000433806 578 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AC024082.2-201ENST00000434771 238 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 HMGB3P11-201ENST00000440127 604 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 Y_RNA.632-201ENST00000459189 102 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 MRPS17P3-201ENST00000465453 385 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AC114797.1-201ENST00000514003 728 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 BTF3P12-201ENST00000519620 469 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AC011979.2-201ENST00000527568 352 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AC060771.1-201ENST00000582031 164 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AL360085.1-201ENST00000604713 532 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AL713922.2-201ENST00000619384 716 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SALL3Q9BXA9 AC004972.1-201ENST00000623934 2209 ntBASIC4.04□□□□□ -1.76
SALL3Q9BXA9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 MTND5P3-201ENST00000438536 1800 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 Y_RNA.128-201ENST00000363391 112 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 Y_RNA.138-201ENST00000363462 102 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms