Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 ERHP1-201ENST00000523006 310 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 CCNG2P1-201ENST00000549521 1000 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 MED28P6-201ENST00000558776 231 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 MIR3921-201ENST00000577308 85 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AC078795.2-201ENST00000602835 1252 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AC245014.2-201ENST00000603689 287 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AC091805.2-201ENST00000603848 235 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AC246785.4-201ENST00000605374 287 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 RNU6-1284P-201ENST00000363701 100 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 SNORA71.1-201ENST00000364523 117 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 RNY4P16-201ENST00000364768 94 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 SNORA23-201ENST00000365128 182 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 RNY3P13-201ENST00000365542 102 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 RNU1-138P-201ENST00000384093 164 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 Y_RNA.582-201ENST00000391023 95 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 FO393413.1-201ENST00000402892 195 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 RNA5SP38-201ENST00000410750 119 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 Y_RNA.625-201ENST00000411256 107 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 UBE2FP1-201ENST00000416536 447 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 RPL27AP8-201ENST00000424277 446 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC005326.1-201ENST00000429197 123 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC119618.1-201ENST00000434191 222 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 ARPC3P1-201ENST00000437218 533 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 KC877373.1-201ENST00000479066 408 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC068587.1-201ENST00000483613 781 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 SEM1P1-201ENST00000506694 209 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC002456.2-201ENST00000509356 380 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 Vault.3-201ENST00000516676 95 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 RNA5SP402-201ENST00000517148 110 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC011979.2-201ENST00000527568 352 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC068790.2-201ENST00000602601 557 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC073648.5-201ENST00000603502 305 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AP001330.4-201ENST00000604350 154 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC087241.4-201ENST00000612441 480 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC005332.10-201ENST00000612725 619 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC091834.1-201ENST00000614543 472 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC015540.1-201ENST00000615828 501 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC098679.4-201ENST00000624241 654 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AL359740.1-201ENST00000624340 592 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 MIR3651-201ENST00000630427 90 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC110994.2-201ENST00000635481 492 ntBASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC28BQ9BUN5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 RNU5E-1-201ENST00000362477 120 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 RNU4-75P-201ENST00000364621 146 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 RNA5SP479-201ENST00000364858 117 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 RNU5A-6P-201ENST00000384136 116 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 RNU6-851P-201ENST00000384565 107 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 MIR1290-201ENST00000408735 78 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 RNU2-66P-201ENST00000410650 161 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 RPL21P24-201ENST00000413752 448 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 MTND3P17-201ENST00000416968 344 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 PIGFP2-201ENST00000421400 651 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 AC010975.2-201ENST00000427781 588 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 MTND1P34-201ENST00000438556 671 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 MTCYBP1-201ENST00000454315 1119 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 AL359385.1-201ENST00000456509 365 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 AC008481.1-201ENST00000463278 396 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 HSPE1P6-201ENST00000479457 291 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 AC138853.1-201ENST00000503549 823 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 AC009901.1-201ENST00000506703 541 ntBASIC2.72□□□□□ -1.97
CCDC28BQ9BUN5 AC008885.1-201ENST00000514930 301 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms