Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC092451.2-201ENST00000538746 658 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AC026464.5-201ENST00000562497 722 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AC068620.3-201ENST00000602749 560 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AC112220.2-201ENST00000605513 533 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 RNU6-1192P-201ENST00000612197 107 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AL589743.7-201ENST00000612637 233 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AC107308.1-201ENST00000615897 301 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 RNU6-489P-201ENST00000618289 107 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AC104985.3-201ENST00000623479 597 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AC012640.5-201ENST00000623897 319 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AP003476.1-201ENST00000623984 516 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AC092447.10-201ENST00000620607 1652 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC006020.1-201ENST00000420179 1854 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 RNU1-91P-201ENST00000364746 163 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 SNORA40.2-201ENST00000390847 128 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC069282.1-201ENST00000411911 526 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 CYCSP48-201ENST00000417124 323 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 OOSP1P1-201ENST00000423265 274 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 ELOCP14-201ENST00000428070 331 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 UBE2D3P1-201ENST00000436669 444 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 COX7BP2-201ENST00000437976 242 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 ELOCP7-201ENST00000439968 331 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 MTCO2P25-201ENST00000447065 681 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AL353705.4-201ENST00000449661 238 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC013267.1-201ENST00000458227 267 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 TRBV1-201ENST00000476502 284 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 GZMAP1-201ENST00000503054 631 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AP003467.2-201ENST00000520175 319 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC021451.1-201ENST00000523498 1129 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 CYCSP26-201ENST00000534107 320 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC024619.4-201ENST00000580924 316 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AL391813.1-201ENST00000603098 260 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AL450336.1-201ENST00000605180 586 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 SNORD14A-201ENST00000606526 91 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AC104763.3-201ENST00000613765 618 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 MIR6132-201ENST00000622083 109 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 MIR6766-201ENST00000622641 72 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 AL359851.1-201ENST00000569460 4997 ntBASIC1.57□□□□□ -2.16
UPK3BQ9BT76 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
UPK3BQ9BT76 MTND5P29-201ENST00000458676 1807 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 MTND4P1-201ENST00000457501 1466 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 U8.2-201ENST00000363156 134 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 RNU4-51P-201ENST00000364206 140 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 RNA5SP37-201ENST00000365420 130 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 RN7SKP223-201ENST00000410582 62 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 Z98742.3-201ENST00000418637 326 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 DPH3P2-201ENST00000422618 250 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 EIF4EP4-201ENST00000424916 578 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 GPM6BP3-201ENST00000442797 145 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 HMGN1P5-201ENST00000448591 263 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 CECR9-201ENST00000453421 199 ntBASIC1.56□□□□□ -2.16
UPK3BQ9BT76 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK3BQ9BT76 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms