Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.57□□□□□ -1.84
HERPUD2Q9BSE4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.57□□□□□ -1.84
HERPUD2Q9BSE4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.57□□□□□ -1.84
HERPUD2Q9BSE4 AC010591.1-201ENST00000603941 649 ntBASIC3.57□□□□□ -1.84
HERPUD2Q9BSE4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.57□□□□□ -1.84
HERPUD2Q9BSE4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.57□□□□□ -1.84
HERPUD2Q9BSE4 MIR7851-201ENST00000610611 160 ntBASIC3.57□□□□□ -1.84
HERPUD2Q9BSE4 AC019176.2-201ENST00000611579 315 ntBASIC3.57□□□□□ -1.84
HERPUD2Q9BSE4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.57□□□□□ -1.84
HERPUD2Q9BSE4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.57□□□□□ -1.84
HERPUD2Q9BSE4 AC099654.7-201ENST00000635788 2127 ntBASIC3.57□□□□□ -1.84
HERPUD2Q9BSE4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HERPUD2Q9BSE4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 NACAP2-201ENST00000318548 624 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 RNU5A-6P-201ENST00000384136 116 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 MIR218-2-201ENST00000385006 110 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 RNU6-387P-201ENST00000411331 105 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 SDCBPP3-201ENST00000419629 891 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 DPPA2P1-201ENST00000428060 556 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 MTATP6P7-201ENST00000453315 681 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 MTND3P5-201ENST00000512798 333 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 SNORA70.19-201ENST00000516717 90 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 MTCYBP20-201ENST00000524239 1129 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 AP003122.3-201ENST00000526316 255 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 AP003392.2-201ENST00000527269 208 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 AC084851.1-201ENST00000529105 249 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 OR4R1P-201ENST00000529879 463 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 MIR1273C-201ENST00000578669 77 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 AC024619.4-201ENST00000580924 316 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 MIR3944-201ENST00000581277 108 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 AC013562.2-201ENST00000611632 603 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 UCA1.1-201ENST00000620952 75 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 AL157786.1-207ENST00000627771 695 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 AL079305.1-201ENST00000623159 3008 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 SRP72P2-201ENST00000344851 1979 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 ZNF826P-207ENST00000622273 1910 ntBASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HERPUD2Q9BSE4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 MTND5P17-201ENST00000418405 1603 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 AC110491.1-201ENST00000562191 2010 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 Y_RNA.296-201ENST00000364930 108 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 RNU6-61P-201ENST00000365528 109 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 Y_RNA.367-201ENST00000365544 101 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 RNU6-193P-201ENST00000410977 107 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 BPY2DP-201ENST00000422208 265 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 AC005300.1-201ENST00000428401 373 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 YME1L1P1-201ENST00000429435 297 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 RANP3-201ENST00000530970 276 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 OR5AL2P-201ENST00000532185 920 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 SUB1P2-201ENST00000556401 297 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 AC008739.2-201ENST00000597006 317 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 AL035413.2-201ENST00000604801 525 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 AC024940.5-201ENST00000622889 474 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 AC093648.1-201ENST00000623546 606 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 AC009161.2-201ENST00000624626 138 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 MIR3199-2-201ENST00000636243 86 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 AC103710.2-202ENST00000641454 2853 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 MFSD8-233ENST00000641482 4860 ntBASIC3.55□□□□□ -1.84
HERPUD2Q9BSE4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 ELF2P3-201ENST00000445099 1506 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 MIR1-2-201ENST00000384961 85 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 SNORD17-201ENST00000390930 237 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 CISD1P1-201ENST00000393907 327 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AC245291.1-201ENST00000419501 328 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 ATG3P1-201ENST00000419507 911 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AC009414.1-201ENST00000427200 443 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms