Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AL512643.1-201ENST00000635735 524 ntBASIC4.81□□□□□ -1.64
TRIM56Q9BRZ2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM56Q9BRZ2 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM56Q9BRZ2 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM56Q9BRZ2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM56Q9BRZ2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM56Q9BRZ2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM56Q9BRZ2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM56Q9BRZ2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRIM56Q9BRZ2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 Y_RNA.48-201ENST00000362710 103 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 RNU6-770P-201ENST00000363929 105 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 Y_RNA.324-201ENST00000365165 102 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 RNU6-1062P-201ENST00000383908 107 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 RNU6-398P-201ENST00000384143 109 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 SAR1AP2-201ENST00000392696 594 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AL132765.1-201ENST00000434165 553 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AC091868.1-201ENST00000508746 304 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AL359273.1-201ENST00000510918 627 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AC113155.1-201ENST00000511141 769 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 RN7SKP276-201ENST00000516242 268 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AL157871.3-201ENST00000557231 293 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AC004584.2-201ENST00000570407 410 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 MIR3934-201ENST00000579806 107 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 MIR4480-201ENST00000582492 71 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 RPS29P30-201ENST00000600975 111 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AL390123.1-201ENST00000603216 237 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AC096772.1-201ENST00000609146 564 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AC130454.1-201ENST00000622948 401 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AC091953.3-201ENST00000623220 236 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 NOL8P1-201ENST00000508336 3529 ntBASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM56Q9BRZ2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 AC116096.1-201ENST00000566804 2314 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 RNA5SP191-201ENST00000362585 102 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 RNU4-44P-201ENST00000363050 141 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 RNU6-1167P-201ENST00000363227 94 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 RNU6-629P-201ENST00000384061 103 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 RNU6-1181P-201ENST00000384191 106 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 MIR628-201ENST00000385229 95 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 AL591034.2-201ENST00000402839 359 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 AL513475.1-201ENST00000406602 315 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 RPS26P2-201ENST00000440331 348 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 AC083982.1-201ENST00000485679 344 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 NDUFB4P9-201ENST00000511646 388 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 AC015912.2-201ENST00000571053 181 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 MIR5699-201ENST00000578903 90 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 AC022726.1-201ENST00000587475 207 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 SNRPGP15-201ENST00000600149 222 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 AC098479.1-201ENST00000609225 154 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 AC091905.4-201ENST00000623432 202 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 Z99571.1-201ENST00000636677 394 ntBASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM56Q9BRZ2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 Y_RNA.19-201ENST00000362462 99 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 RNU6-1179P-201ENST00000384667 107 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 CYCSP33-201ENST00000414485 327 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 OR2AM1P-201ENST00000422137 422 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 RPL27AP8-201ENST00000424277 446 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 AL592045.1-201ENST00000429867 352 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 AL049745.1-201ENST00000433953 286 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 USP9YP7-201ENST00000436723 430 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 AC112498.1-201ENST00000444401 332 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 OR2AQ1P-201ENST00000451972 200 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 USP9YP32-201ENST00000452432 430 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 AC022795.1-201ENST00000473808 480 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 RNU6-911P-201ENST00000516523 104 ntBASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
TRIM56Q9BRZ2 TRAV32-201ENST00000553993 340 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms