Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 Y_RNA.576-201ENST00000384781 102 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 Z92545.1-201ENST00000411782 234 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 MTND4P18-201ENST00000447010 465 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 WASF1P1-201ENST00000447560 1131 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 DPPA3P1-201ENST00000448050 469 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 CACYBPP2-201ENST00000453625 678 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AL162395.1-201ENST00000457882 422 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 GMFBP1-201ENST00000467831 427 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC116353.2-201ENST00000505332 712 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 RNU6-123P-201ENST00000516163 102 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 SCARNA15.2-201ENST00000516409 127 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 Y_RNA.689-201ENST00000516589 107 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 HIF1AP1-201ENST00000553642 175 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC024619.4-201ENST00000580924 316 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC006557.5-201ENST00000603126 811 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC174048.1-201ENST00000603389 144 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC025946.2-201ENST00000603398 234 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC008945.2-201ENST00000606056 604 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 uc_338.32-201ENST00000615087 172 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 uc_338.11-201ENST00000619132 160 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC103858.2-201ENST00000621471 543 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC024940.5-201ENST00000622889 474 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC008568.2-201ENST00000623862 2313 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 RNA5SP322-201ENST00000363617 119 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 SNORD115-7-201ENST00000365306 82 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 RNU2-29P-201ENST00000410423 189 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 USP9YP6-201ENST00000413550 854 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 RPL30P2-201ENST00000414021 291 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 CALM2P2-201ENST00000428512 440 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 HMGB1P12-201ENST00000438594 598 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AL357552.1-201ENST00000445254 415 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 RNU6-835P-201ENST00000516974 104 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 IGKV2-23-201ENST00000518729 323 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 CBX3P5-201ENST00000552017 521 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AP005205.1-201ENST00000563503 508 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AC007687.1-201ENST00000602704 304 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 DISC2.1-201ENST00000612827 205 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AC012409.4-201ENST00000612923 249 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AL359547.2-201ENST00000615810 418 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AC011155.2-201ENST00000623202 216 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 AP001486.2-201ENST00000561652 5113 ntBASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.59□□□□□ -1.83
PAAF1Q9BRP4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PAAF1Q9BRP4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
PAAF1Q9BRP4 AC116096.1-201ENST00000566804 2314 ntBASIC3.59□□□□□ -1.84
PAAF1Q9BRP4 AL513302.2-201ENST00000562313 1842 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 AL672296.1-201ENST00000427780 2158 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 RNU1-70P-201ENST00000362618 164 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 MIR493-201ENST00000385254 89 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 RNU6-817P-201ENST00000391083 104 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 RNU6-908P-201ENST00000410160 94 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 RNU6-1068P-201ENST00000410958 103 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 AL139413.1-201ENST00000421309 217 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 AC007919.1-201ENST00000429380 217 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 AL591212.2-201ENST00000433923 257 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms