Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 RNU1-105P-201ENST00000363470 161 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 SNORD116-8-201ENST00000384365 95 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 RNU6-851P-201ENST00000384565 107 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 MRPL42P2-201ENST00000403169 426 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 AL122016.1-201ENST00000403365 367 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 RNU2-36P-201ENST00000410361 191 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 RPS15AP12-201ENST00000419498 388 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 AC104651.1-201ENST00000427559 735 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.34□□□□□ -1.87
SDF4Q9BRK5 AC107083.1-201ENST00000439643 279 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.34□□□□□ -1.87
SDF4Q9BRK5 PGBD4P3-201ENST00000440731 581 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 RPS24P13-201ENST00000442520 397 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 FABP5P15-201ENST00000453566 214 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.34□□□□□ -1.87
SDF4Q9BRK5 RPL37P6-201ENST00000460682 294 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
SDF4Q9BRK5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.34□□□□□ -1.87
SDF4Q9BRK5 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.34□□□□□ -1.87
SDF4Q9BRK5 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.34□□□□□ -1.87
SDF4Q9BRK5 AC114786.4-201ENST00000508771 728 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 RAC1P5-201ENST00000512182 576 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
SDF4Q9BRK5 MTCO1P47-201ENST00000523889 1271 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 OSBPL9P5-201ENST00000542581 171 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 RPL21P5-201ENST00000554662 472 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 MIR4506-201ENST00000584693 77 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 AL358072.1-201ENST00000604156 575 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 AC004805.2-201ENST00000605382 482 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 AC078883.4-201ENST00000623218 367 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.34□□□□□ -1.87
SDF4Q9BRK5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SDF4Q9BRK5 AL365361.1-201ENST00000566942 3481 ntBASIC3.34□□□□□ -1.87
SDF4Q9BRK5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.34□□□□□ -1.88
SDF4Q9BRK5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SDF4Q9BRK5 AL035425.3-201ENST00000564206 4996 ntBASIC3.34□□□□□ -1.88
SDF4Q9BRK5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 RNU1-35P-201ENST00000362782 153 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 RNU6-960P-201ENST00000364056 120 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 RNU6-817P-201ENST00000391083 104 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 SNORA26.8-201ENST00000391306 124 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AC137499.1-201ENST00000427602 88 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AL139132.1-201ENST00000431587 344 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 NEFMP1-201ENST00000443423 1006 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AP001486.1-201ENST00000463339 476 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AL049873.1-201ENST00000480540 376 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 BET1P1-201ENST00000482276 359 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AC010587.1-201ENST00000505809 469 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AC118465.1-201ENST00000513820 1271 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 RNU6-1092P-201ENST00000516955 87 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 RNA5SP337-201ENST00000517007 109 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AL359212.1-201ENST00000556608 614 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AC009977.1-201ENST00000586015 570 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 HMGN1P30-201ENST00000589286 268 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AL137843.1-201ENST00000605078 385 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AC007619.2-201ENST00000605743 379 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AC004832.5-201ENST00000608677 401 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AC108479.2-201ENST00000617314 601 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AC007998.5-201ENST00000622938 237 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AC025048.6-202ENST00000627667 438 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 AC084035.1-201ENST00000634543 607 ntBASIC3.33□□□□□ -1.88
SDF4Q9BRK5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.33□□□□□ -1.88
SDF4Q9BRK5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 HSPE1P11-201ENST00000339579 310 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 RNU6-884P-201ENST00000363889 107 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 SNORA9.2-201ENST00000365361 133 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 MIR181B1-201ENST00000385240 110 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AL021407.1-201ENST00000404531 386 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 NPM1P11-201ENST00000417106 855 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AL589872.1-201ENST00000426602 288 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 GPM6BP2-201ENST00000432046 144 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 RPS29P6-201ENST00000438196 145 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 AC025750.2-201ENST00000442609 450 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 GPM6BP1-201ENST00000446387 144 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 CECR9-201ENST00000453421 199 ntBASIC3.32□□□□□ -1.88
SDF4Q9BRK5 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.32□□□□□ -1.88
SDF4Q9BRK5 MRPS17P3-201ENST00000465453 385 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms