Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.7□□□□□ -1.98
SSX3Q99909 AC009977.1-201ENST00000586015 570 ntBASIC2.7□□□□□ -1.98
SSX3Q99909 AC067852.3-201ENST00000589177 561 ntBASIC2.7□□□□□ -1.98
SSX3Q99909 AC007619.2-201ENST00000605743 379 ntBASIC2.7□□□□□ -1.98
SSX3Q99909 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.7□□□□□ -1.98
SSX3Q99909 AL442067.2-201ENST00000614033 363 ntBASIC2.7□□□□□ -1.98
SSX3Q99909 AC108479.2-201ENST00000617314 601 ntBASIC2.7□□□□□ -1.98
SSX3Q99909 AL589994.2-201ENST00000621124 579 ntBASIC2.7□□□□□ -1.98
SSX3Q99909 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.7□□□□□ -1.98
SSX3Q99909 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.7□□□□□ -1.98
SSX3Q99909 MIR7515-201ENST00000637837 67 ntBASIC2.7□□□□□ -1.98
SSX3Q99909 AC099654.13-201ENST00000639774 207 ntBASIC2.7□□□□□ -1.98
SSX3Q99909 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SSX3Q99909 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.7□□□□□ -1.98
SSX3Q99909 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SSX3Q99909 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.69□□□□□ -1.98
SSX3Q99909 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
SSX3Q99909 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SSX3Q99909 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SSX3Q99909 AC093010.3-201ENST00000570269 15214 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SSX3Q99909 VTRNA1-1-201ENST00000363120 99 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 RNU6-461P-201ENST00000364195 107 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 RNU5E-6P-201ENST00000365574 115 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SSX3Q99909 AL139397.2-201ENST00000404529 772 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 RNU2-25P-201ENST00000411041 191 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.69□□□□□ -1.98
SSX3Q99909 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.69□□□□□ -1.98
SSX3Q99909 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.69□□□□□ -1.98
SSX3Q99909 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.69□□□□□ -1.98
SSX3Q99909 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.69□□□□□ -1.98
SSX3Q99909 MTND1P28-201ENST00000435623 950 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 SNRPEP9-201ENST00000436794 238 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.69□□□□□ -1.98
SSX3Q99909 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.69□□□□□ -1.98
SSX3Q99909 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.69□□□□□ -1.98
SSX3Q99909 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.69□□□□□ -1.98
SSX3Q99909 AC008571.1-201ENST00000467232 300 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 MTND1P3-201ENST00000484956 952 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 AC110794.1-201ENST00000505816 425 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.69□□□□□ -1.98
SSX3Q99909 AC119751.5-201ENST00000514077 770 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.69□□□□□ -1.98
SSX3Q99909 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.69□□□□□ -1.98
SSX3Q99909 AL161798.1-201ENST00000604630 131 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 AC004805.2-201ENST00000605382 482 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.69□□□□□ -1.98
SSX3Q99909 AL356321.1-201ENST00000621360 228 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.69□□□□□ -1.98
SSX3Q99909 MIR6733-201ENST00000635723 61 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 MIR3974-201ENST00000637126 96 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 MTND5P29-201ENST00000458676 1807 ntBASIC2.69□□□□□ -1.98
SSX3Q99909 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SSX3Q99909 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
SSX3Q99909 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.69□□□□□ -1.98
SSX3Q99909 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SSX3Q99909 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SSX3Q99909 AL161431.1-201ENST00000618966 4205 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 GNG5P1-201ENST00000255500 204 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SSX3Q99909 U3.6-201ENST00000363622 211 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 RNU6-512P-201ENST00000364438 103 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 SNORA68.1-201ENST00000364537 132 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 MIR23A-201ENST00000385245 73 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.68□□□□□ -1.98
SSX3Q99909 MIR888-201ENST00000401186 77 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 RNU2-8P-201ENST00000410727 190 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 AC023141.4-201ENST00000412031 328 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.68□□□□□ -1.98
SSX3Q99909 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.68□□□□□ -1.98
SSX3Q99909 GPM6BP2-201ENST00000432046 144 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.68□□□□□ -1.98
SSX3Q99909 USP9YP15-201ENST00000442391 422 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 GPM6BP1-201ENST00000446387 144 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 Z99127.3-201ENST00000448158 395 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 RPS27AP8-201ENST00000452665 445 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 CECR9-201ENST00000453421 199 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 MTCO2P29-201ENST00000465212 189 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.68□□□□□ -1.98
SSX3Q99909 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.68□□□□□ -1.98
SSX3Q99909 AC010486.3-201ENST00000511602 785 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 RNU7-51P-201ENST00000516560 62 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 RPPH1-2P-201ENST00000516688 293 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 RNU6-1092P-201ENST00000516955 87 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.68□□□□□ -1.98
SSX3Q99909 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.68□□□□□ -1.98
SSX3Q99909 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SSX3Q99909 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.68□□□□□ -1.98
SSX3Q99909 MIR3117-201ENST00000584034 78 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.68□□□□□ -1.98
SSX3Q99909 AL590229.1-201ENST00000603497 542 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.68□□□□□ -1.98
SSX3Q99909 AC107294.1-201ENST00000609524 467 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SSX3Q99909 AC008250.2-201ENST00000615261 205 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.68□□□□□ -1.98
SSX3Q99909 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.68□□□□□ -1.98
SSX3Q99909 MIR3651-201ENST00000630427 90 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms