Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SMOQ99835 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMOQ99835 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.84□□□□□ -1.79
SMOQ99835 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMOQ99835 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMOQ99835 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMOQ99835 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SMOQ99835 RNU6-1011P-201ENST00000384668 107 ntBASIC3.84□□□□□ -1.79
SMOQ99835 HSPE1P8-201ENST00000406997 288 ntBASIC3.84□□□□□ -1.79
SMOQ99835 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.84□□□□□ -1.79
SMOQ99835 ARL5AP1-201ENST00000418991 388 ntBASIC3.84□□□□□ -1.79
SMOQ99835 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.84□□□□□ -1.79
SMOQ99835 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.84□□□□□ -1.79
SMOQ99835 RPS15AP27-201ENST00000449183 343 ntBASIC3.84□□□□□ -1.79
SMOQ99835 PPP1R2P5-201ENST00000457256 603 ntBASIC3.84□□□□□ -1.79
SMOQ99835 SCARNA18-201ENST00000459004 134 ntBASIC3.84□□□□□ -1.79
SMOQ99835 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.84□□□□□ -1.79
SMOQ99835 AC106872.2-201ENST00000494303 480 ntBASIC3.84□□□□□ -1.79
SMOQ99835 Y_RNA.654-201ENST00000497848 106 ntBASIC3.84□□□□□ -1.79
SMOQ99835 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.84□□□□□ -1.79
SMOQ99835 GMPSP1-201ENST00000514075 579 ntBASIC3.84□□□□□ -1.79
SMOQ99835 RN7SKP18-201ENST00000516005 275 ntBASIC3.84□□□□□ -1.79
SMOQ99835 SNORA31.3-201ENST00000516029 96 ntBASIC3.84□□□□□ -1.79
SMOQ99835 RN7SKP60-201ENST00000516985 239 ntBASIC3.84□□□□□ -1.79
SMOQ99835 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.84□□□□□ -1.79
SMOQ99835 RANP9-201ENST00000519957 271 ntBASIC3.84□□□□□ -1.79
SMOQ99835 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.84□□□□□ -1.79
SMOQ99835 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.84□□□□□ -1.79
SMOQ99835 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.84□□□□□ -1.79
SMOQ99835 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.84□□□□□ -1.79
SMOQ99835 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.84□□□□□ -1.79
SMOQ99835 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.84□□□□□ -1.79
SMOQ99835 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.84□□□□□ -1.79
SMOQ99835 SNORD84-203ENST00000584275 78 ntBASIC3.84□□□□□ -1.79
SMOQ99835 MIR3922-201ENST00000585192 84 ntBASIC3.84□□□□□ -1.79
SMOQ99835 AL442067.2-201ENST00000614033 363 ntBASIC3.84□□□□□ -1.79
SMOQ99835 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMOQ99835 AC007742.2-201ENST00000618226 398 ntBASIC3.84□□□□□ -1.79
SMOQ99835 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.84□□□□□ -1.79
SMOQ99835 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SMOQ99835 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.84□□□□□ -1.79
SMOQ99835 AC004925.1-201ENST00000624256 2706 ntBASIC3.84□□□□□ -1.8
SMOQ99835 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMOQ99835 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMOQ99835 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.83□□□□□ -1.8
SMOQ99835 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.83□□□□□ -1.8
SMOQ99835 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMOQ99835 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SMOQ99835 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMOQ99835 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMOQ99835 SNORA71.3-201ENST00000362582 128 ntBASIC3.83□□□□□ -1.8
SMOQ99835 RNU6-288P-201ENST00000363690 104 ntBASIC3.83□□□□□ -1.8
SMOQ99835 SNORA51.2-201ENST00000364595 132 ntBASIC3.83□□□□□ -1.8
SMOQ99835 RNU6-190P-201ENST00000384154 102 ntBASIC3.83□□□□□ -1.8
SMOQ99835 Y_RNA.474-201ENST00000384341 102 ntBASIC3.83□□□□□ -1.8
SMOQ99835 Y_RNA.530-201ENST00000384587 101 ntBASIC3.83□□□□□ -1.8
SMOQ99835 MIR670-201ENST00000390142 98 ntBASIC3.83□□□□□ -1.8
SMOQ99835 RNA5SP171-201ENST00000391071 115 ntBASIC3.83□□□□□ -1.8
SMOQ99835 HMGN2P8-201ENST00000391458 268 ntBASIC3.83□□□□□ -1.8
SMOQ99835 CISD1P1-201ENST00000393907 327 ntBASIC3.83□□□□□ -1.8
SMOQ99835 RPS20P15-201ENST00000412792 311 ntBASIC3.83□□□□□ -1.8
SMOQ99835 AC016831.2-201ENST00000417179 352 ntBASIC3.83□□□□□ -1.8
SMOQ99835 RPL21P109-201ENST00000422213 475 ntBASIC3.83□□□□□ -1.8
SMOQ99835 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.83□□□□□ -1.8
SMOQ99835 FTH1P6-201ENST00000430768 320 ntBASIC3.83□□□□□ -1.8
SMOQ99835 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.83□□□□□ -1.8
SMOQ99835 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.83□□□□□ -1.8
SMOQ99835 AC233279.1-201ENST00000455300 423 ntBASIC3.83□□□□□ -1.8
SMOQ99835 HSPE1P6-201ENST00000479457 291 ntBASIC3.83□□□□□ -1.8
SMOQ99835 VN1R104P-201ENST00000505115 1009 ntBASIC3.83□□□□□ -1.8
SMOQ99835 Y_RNA.691-201ENST00000516611 103 ntBASIC3.83□□□□□ -1.8
SMOQ99835 SNORA70.18-201ENST00000516696 98 ntBASIC3.83□□□□□ -1.8
SMOQ99835 RNA5SP143-201ENST00000516936 115 ntBASIC3.83□□□□□ -1.8
SMOQ99835 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.83□□□□□ -1.8
SMOQ99835 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.83□□□□□ -1.8
SMOQ99835 ANP32BP3-201ENST00000559213 706 ntBASIC3.83□□□□□ -1.8
SMOQ99835 AC104763.2-201ENST00000604179 382 ntBASIC3.83□□□□□ -1.8
SMOQ99835 AL050343.2-201ENST00000607338 280 ntBASIC3.83□□□□□ -1.8
SMOQ99835 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.83□□□□□ -1.8
SMOQ99835 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMOQ99835 AP003400.5-201ENST00000624827 617 ntBASIC3.83□□□□□ -1.8
SMOQ99835 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.83□□□□□ -1.8
SMOQ99835 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SMOQ99835 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SMOQ99835 PRO1804-201ENST00000623780 2050 ntBASIC3.83□□□□□ -1.8
SMOQ99835 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMOQ99835 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMOQ99835 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMOQ99835 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
SMOQ99835 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.82□□□□□ -1.8
SMOQ99835 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.82□□□□□ -1.8
SMOQ99835 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SMOQ99835 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMOQ99835 FRG1CP-201ENST00000358464 769 ntBASIC3.82□□□□□ -1.8
SMOQ99835 Y_RNA.67-201ENST00000362870 100 ntBASIC3.82□□□□□ -1.8
SMOQ99835 Y_RNA.414-201ENST00000384011 101 ntBASIC3.82□□□□□ -1.8
SMOQ99835 RN7SKP140-201ENST00000411196 284 ntBASIC3.82□□□□□ -1.8
SMOQ99835 DBIP2-201ENST00000419076 262 ntBASIC3.82□□□□□ -1.8
SMOQ99835 USP9YP20-201ENST00000419224 558 ntBASIC3.82□□□□□ -1.8
SMOQ99835 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms