Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC106052.1-201ENST00000608029 497 ntBASIC1.41□□□□□ -2.18
ABCA3Q99758 AC079395.3-201ENST00000615161 484 ntBASIC1.41□□□□□ -2.18
ABCA3Q99758 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.41□□□□□ -2.18
ABCA3Q99758 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.4□□□□□ -2.18
ABCA3Q99758 RNU4-42P-201ENST00000364738 142 ntBASIC1.4□□□□□ -2.18
ABCA3Q99758 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.4□□□□□ -2.18
ABCA3Q99758 OSTCP8-201ENST00000445117 448 ntBASIC1.4□□□□□ -2.18
ABCA3Q99758 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.4□□□□□ -2.18
ABCA3Q99758 COX6CP18-201ENST00000448769 222 ntBASIC1.4□□□□□ -2.18
ABCA3Q99758 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.4□□□□□ -2.18
ABCA3Q99758 SNORA31.16-201ENST00000516773 139 ntBASIC1.4□□□□□ -2.18
ABCA3Q99758 IMMP1LP2-201ENST00000552954 492 ntBASIC1.4□□□□□ -2.18
ABCA3Q99758 ZNF92P3-201ENST00000596594 954 ntBASIC1.4□□□□□ -2.18
ABCA3Q99758 AC008749.1-201ENST00000597650 306 ntBASIC1.4□□□□□ -2.18
ABCA3Q99758 AL590095.2-201ENST00000604136 117 ntBASIC1.4□□□□□ -2.18
ABCA3Q99758 AC021749.1-201ENST00000604322 607 ntBASIC1.4□□□□□ -2.18
ABCA3Q99758 AC109809.1-201ENST00000619665 545 ntBASIC1.4□□□□□ -2.18
ABCA3Q99758 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.4□□□□□ -2.19
ABCA3Q99758 RNU6-716P-201ENST00000365621 103 ntBASIC1.4□□□□□ -2.19
ABCA3Q99758 MIR532-201ENST00000385025 91 ntBASIC1.4□□□□□ -2.19
ABCA3Q99758 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.4□□□□□ -2.19
ABCA3Q99758 AL353718.1-201ENST00000451028 517 ntBASIC1.4□□□□□ -2.19
ABCA3Q99758 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.4□□□□□ -2.19
ABCA3Q99758 SNORA31.25-201ENST00000517242 134 ntBASIC1.4□□□□□ -2.19
ABCA3Q99758 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.4□□□□□ -2.19
ABCA3Q99758 AL355297.2-201ENST00000604792 129 ntBASIC1.4□□□□□ -2.19
ABCA3Q99758 AC007742.2-201ENST00000618226 398 ntBASIC1.4□□□□□ -2.19
ABCA3Q99758 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
ABCA3Q99758 AL390862.1-201ENST00000635467 1469 ntBASIC1.39□□□□□ -2.19
ABCA3Q99758 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
ABCA3Q99758 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.39□□□□□ -2.19
ABCA3Q99758 AL356432.1-201ENST00000405809 419 ntBASIC1.39□□□□□ -2.19
ABCA3Q99758 TXNP7-201ENST00000406296 293 ntBASIC1.39□□□□□ -2.19
ABCA3Q99758 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.39□□□□□ -2.19
ABCA3Q99758 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.39□□□□□ -2.19
ABCA3Q99758 OR6K5P-201ENST00000447050 945 ntBASIC1.39□□□□□ -2.19
ABCA3Q99758 AC096751.1-202ENST00000502691 1067 ntBASIC1.39□□□□□ -2.19
ABCA3Q99758 RNA5SP330-201ENST00000517096 96 ntBASIC1.39□□□□□ -2.19
ABCA3Q99758 MIR3973-201ENST00000579824 107 ntBASIC1.39□□□□□ -2.19
ABCA3Q99758 DPRXP5-201ENST00000604662 539 ntBASIC1.39□□□□□ -2.19
ABCA3Q99758 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.39□□□□□ -2.19
ABCA3Q99758 AC011330.2-201ENST00000621680 635 ntBASIC1.39□□□□□ -2.19
ABCA3Q99758 AC022513.1-201ENST00000624512 117 ntBASIC1.39□□□□□ -2.19
ABCA3Q99758 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
ABCA3Q99758 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ABCA3Q99758 USP12PX-201ENST00000432383 1057 ntBASIC1.38□□□□□ -2.19
ABCA3Q99758 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.38□□□□□ -2.19
ABCA3Q99758 AL357134.1-201ENST00000445848 426 ntBASIC1.38□□□□□ -2.19
ABCA3Q99758 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.38□□□□□ -2.19
ABCA3Q99758 AC020699.1-201ENST00000505161 445 ntBASIC1.38□□□□□ -2.19
ABCA3Q99758 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.38□□□□□ -2.19
ABCA3Q99758 NDUFB4P2-201ENST00000509515 391 ntBASIC1.38□□□□□ -2.19
ABCA3Q99758 RNU2-19P-201ENST00000517288 84 ntBASIC1.38□□□□□ -2.19
ABCA3Q99758 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.38□□□□□ -2.19
ABCA3Q99758 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.38□□□□□ -2.19
ABCA3Q99758 AC010487.4-201ENST00000637027 61 ntBASIC1.38□□□□□ -2.19
ABCA3Q99758 MIR330-201ENST00000362196 94 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 RNU6-263P-201ENST00000363811 107 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
ABCA3Q99758 AL513475.1-201ENST00000406602 315 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA3Q99758 RPS15AP38-201ENST00000413110 372 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 OFD1P18Y-201ENST00000420889 959 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 AL121601.2-201ENST00000438019 707 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 BX248409.1-201ENST00000455497 255 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 OR52A4P-202ENST00000481634 799 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 AC093852.1-201ENST00000503587 266 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 AC105313.1-201ENST00000509121 353 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 AC092451.2-201ENST00000538746 658 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA3Q99758 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.37□□□□□ -2.19
ABCA3Q99758 AC005498.1-201ENST00000592125 465 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 AC025165.5-201ENST00000602802 578 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 AC211469.2-201ENST00000605461 205 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 AL360181.4-201ENST00000621752 134 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 AC068620.4-201ENST00000636730 1182 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
ABCA3Q99758 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
ABCA3Q99758 SNORD114-23-201ENST00000363536 72 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 RNU6-1293P-201ENST00000384077 107 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 RPS20P15-201ENST00000412792 311 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.37□□□□□ -2.19
ABCA3Q99758 MTCO3P12-201ENST00000416718 547 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.37□□□□□ -2.19
ABCA3Q99758 AC004383.1-201ENST00000438135 289 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 CASP1P1-201ENST00000526345 212 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 AC022880.1-201ENST00000534017 973 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 HSPE1P4-201ENST00000550617 308 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 MIR4529-201ENST00000578110 78 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 MTCO2P22-201ENST00000603246 681 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 RNU6-156P-201ENST00000621869 107 ntBASIC1.37□□□□□ -2.19
ABCA3Q99758 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
ABCA3Q99758 RNU6-173P-201ENST00000364215 104 ntBASIC1.36□□□□□ -2.19
ABCA3Q99758 RNU6-198P-201ENST00000384258 104 ntBASIC1.36□□□□□ -2.19
ABCA3Q99758 RNU1-78P-201ENST00000391248 165 ntBASIC1.36□□□□□ -2.19
ABCA3Q99758 RNU4-78P-201ENST00000410940 126 ntBASIC1.36□□□□□ -2.19
ABCA3Q99758 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA3Q99758 NEFMP1-201ENST00000443423 1006 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms