Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CDX2Q99626 RNU6-359P-201ENST00000365466 108 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 RNU6-1122P-201ENST00000384449 107 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 RNU1-57P-201ENST00000384491 166 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 RNU6-925P-201ENST00000384629 104 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AP000275.1-201ENST00000411943 390 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 MTATP6P20-201ENST00000414147 562 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AL445685.2-201ENST00000422551 342 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 PPP1R11P2-201ENST00000423543 382 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 MTCO2P23-201ENST00000425216 680 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX2Q99626 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.2□□□□□ -2.06
CDX2Q99626 SUMO1P4-201ENST00000429430 302 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.2□□□□□ -2.06
CDX2Q99626 OR10R1P-201ENST00000441524 1141 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.2□□□□□ -2.06
CDX2Q99626 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX2Q99626 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.2□□□□□ -2.06
CDX2Q99626 RPL30P5-201ENST00000494923 336 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX2Q99626 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.2□□□□□ -2.06
CDX2Q99626 SNORA25.15-201ENST00000516487 89 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.2□□□□□ -2.06
CDX2Q99626 DEFB131D-201ENST00000526803 184 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AP003497.1-201ENST00000528472 562 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX2Q99626 AMZ2P1-203ENST00000565833 850 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AC011260.1-201ENST00000578420 472 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 MIR4446-201ENST00000578505 67 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 MIR3683-201ENST00000580847 82 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 BNIP3P26-201ENST00000600827 554 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AP002826.1-201ENST00000608835 315 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AC107075.1-201ENST00000613695 314 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AC010678.1-201ENST00000614118 713 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AC010297.1-201ENST00000623948 149 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 OR4G3P-201ENST00000633500 913 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 FO624990.1-201ENST00000636373 85 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDX2Q99626 AC012321.1-201ENST00000561622 1588 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 RNU1-138P-201ENST00000384093 164 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 SNORA51.11-201ENST00000384442 131 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 SNORD116-12-201ENST00000384468 92 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 RNU6-1197P-201ENST00000391183 107 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.19□□□□□ -2.06
CDX2Q99626 TIMM9P2-201ENST00000419324 266 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AL139421.1-201ENST00000423010 169 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 HMGB1P27-201ENST00000431429 603 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.19□□□□□ -2.06
CDX2Q99626 TAAR7P-201ENST00000436141 242 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AL606517.1-201ENST00000446914 387 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AC009961.3-201ENST00000449832 765 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AL009048.1-201ENST00000450437 298 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AC010099.1-201ENST00000455434 375 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.19□□□□□ -2.06
CDX2Q99626 AL135752.1-201ENST00000479477 471 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.19□□□□□ -2.06
CDX2Q99626 UBE2V1P12-201ENST00000503954 474 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 RPL37P25-201ENST00000507308 276 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AC079395.1-201ENST00000510981 262 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.19□□□□□ -2.06
CDX2Q99626 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDX2Q99626 OR7K1P-201ENST00000546439 926 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AC004486.1-201ENST00000546846 233 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AL132857.1-201ENST00000555180 708 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.19□□□□□ -2.06
CDX2Q99626 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.19□□□□□ -2.06
CDX2Q99626 AC090615.1-201ENST00000577519 154 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.19□□□□□ -2.06
CDX2Q99626 AC013553.2-201ENST00000604244 589 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CDX2Q99626 MIR6779-201ENST00000617283 64 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 CU459211.1-201ENST00000635667 749 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AC013437.2-201ENST00000639587 677 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 DDX43P2-201ENST00000604753 1354 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 AL390862.1-201ENST00000635467 1469 ntBASIC2.19□□□□□ -2.06
CDX2Q99626 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
CDX2Q99626 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CDX2Q99626 RNU6-28P-201ENST00000362378 107 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 RNU6-270P-201ENST00000364131 105 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 ANAPC10P1-201ENST00000395991 556 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 AL136310.1-201ENST00000404926 654 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDX2Q99626 RNU4-22P-201ENST00000411058 166 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 CCDC58P2-201ENST00000417131 366 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 RPS3AP37-201ENST00000419176 745 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 AL953862.1-201ENST00000423016 168 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 TMEM167AP1-201ENST00000423409 219 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.18□□□□□ -2.06
CDX2Q99626 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.18□□□□□ -2.06
CDX2Q99626 AC004854.1-201ENST00000440356 349 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 BX322784.1-201ENST00000455793 1077 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 AL121594.1-201ENST00000475906 575 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 RPL31P60-201ENST00000478450 367 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 GTF2IP9-201ENST00000502460 301 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDX2Q99626 AL359273.1-201ENST00000510918 627 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 RNU6-714P-201ENST00000516963 103 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.18□□□□□ -2.06
CDX2Q99626 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms