Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 USP9YP26-201ENST00000421008 661 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AL354692.1-201ENST00000423044 315 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 USP9YP24-201ENST00000434374 697 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 USP9YP17-201ENST00000444617 696 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 MTND2P39-201ENST00000457230 764 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 UBE2V1P12-201ENST00000503954 474 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AC107222.1-201ENST00000510899 637 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AC010486.1-201ENST00000511793 424 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 MTND5P13-201ENST00000513046 1079 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AC110760.3-202ENST00000515177 371 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 RNA5SP216-201ENST00000516111 123 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 RNU6-927P-201ENST00000516199 100 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 MTND2P7-201ENST00000521337 640 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 ISCA1P3-201ENST00000577104 373 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AC007938.3-201ENST00000604965 623 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AL158042.1-201ENST00000605338 460 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AC012150.2-201ENST00000621300 544 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.45□□□□□ -2.02
RPRD1AQ96P16 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 RNA5SP181-201ENST00000410246 98 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 RNA5SP508-201ENST00000411327 119 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 RPL21P24-201ENST00000413752 448 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 USP9YP13-201ENST00000417797 480 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 BTF3L4P3-201ENST00000418879 476 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 SEPT2P1-201ENST00000419651 180 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 MTCO2P23-201ENST00000425216 680 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 USP12PX-201ENST00000432383 1057 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 SNRPEP9-201ENST00000436794 238 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AL009048.1-201ENST00000450437 298 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 LINC00888-204ENST00000487386 421 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 RPS27AP10-201ENST00000496103 208 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 HMGB3P3-201ENST00000510526 400 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AC023824.2-201ENST00000566185 400 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 DPPA3P3-201ENST00000603842 430 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AL592221.1-201ENST00000605266 382 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AC004805.2-201ENST00000605382 482 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AC067747.1-201ENST00000608026 250 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AL391834.2-201ENST00000609982 546 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AC013562.2-201ENST00000611632 603 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AP000484.1-201ENST00000620067 1252 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AC097655.1-201ENST00000635075 318 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 AC010149.2-201ENST00000637608 315 ntBASIC2.44□□□□□ -2.02
RPRD1AQ96P16 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RPRD1AQ96P16 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
RPRD1AQ96P16 AC016717.2-201ENST00000609089 5141 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.43□□□□□ -2.02
RPRD1AQ96P16 RNU6-906P-201ENST00000384700 70 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 AL445529.1-201ENST00000398713 389 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RPRD1AQ96P16 AL139397.2-201ENST00000404529 772 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 RNU6-1328P-201ENST00000410938 106 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.43□□□□□ -2.02
RPRD1AQ96P16 BPY2DP-201ENST00000422208 265 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 SKA2P1-201ENST00000425592 390 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 MTCO3P30-201ENST00000426425 670 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 ELOCP14-201ENST00000428070 331 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.43□□□□□ -2.02
RPRD1AQ96P16 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.43□□□□□ -2.02
RPRD1AQ96P16 MTND1P28-201ENST00000435623 950 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 ELOCP7-201ENST00000439968 331 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 FAM103A2P-201ENST00000444122 354 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 HIGD1AP2-201ENST00000446367 280 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 AC013267.1-201ENST00000458227 267 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 AC128713.1-201ENST00000471495 306 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.43□□□□□ -2.02
RPRD1AQ96P16 AC090096.1-201ENST00000489168 390 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 AC098591.2-201ENST00000510152 315 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.43□□□□□ -2.02
RPRD1AQ96P16 AC008413.1-201ENST00000511864 177 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 MTCO2P15-201ENST00000532655 656 ntBASIC2.43□□□□□ -2.02
RPRD1AQ96P16 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms