Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 CR848007.2-201ENST00000424918 787 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC42Q96M95 RNU7-140P-201ENST00000459546 60 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 TRBV1-201ENST00000476502 284 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 AC025181.1-201ENST00000477507 416 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 AC104564.1-201ENST00000493028 407 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 RPS29P21-201ENST00000496272 170 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 RPL23AP63-201ENST00000498752 471 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC42Q96M95 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.73□□□□□ -2.13
CCDC42Q96M95 AC091965.2-201ENST00000512324 613 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
CCDC42Q96M95 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC42Q96M95 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC42Q96M95 AC022880.1-201ENST00000534017 973 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC42Q96M95 AC091544.4-201ENST00000555268 342 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC42Q96M95 MIR4299-201ENST00000577899 72 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 AF131215.7-201ENST00000602443 707 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 AC009318.2-201ENST00000610917 651 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 AL159972.1-201ENST00000625150 448 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 HPVC1-201ENST00000629899 1198 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
CCDC42Q96M95 ZNF876P-202ENST00000398732 1485 ntBASIC1.73□□□□□ -2.13
CCDC42Q96M95 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC42Q96M95 RNU4-26P-201ENST00000410270 107 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 RNU6-575P-201ENST00000411326 105 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC42Q96M95 AL445183.3-201ENST00000414168 502 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 EDDM3CP-201ENST00000415977 425 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 ZYG11AP1-201ENST00000430329 837 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC42Q96M95 AC005297.2-201ENST00000450430 606 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC42Q96M95 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC42Q96M95 AC069528.1-202ENST00000482888 637 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC42Q96M95 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CCDC42Q96M95 AC008526.1-201ENST00000509149 338 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 RNU6-250P-201ENST00000516958 103 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.72□□□□□ -2.13
CCDC42Q96M95 RANP3-201ENST00000530970 276 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.72□□□□□ -2.13
CCDC42Q96M95 AP001269.3-201ENST00000588718 329 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC42Q96M95 uc_338.5-201ENST00000611839 155 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 ZNF702P-202ENST00000434269 1966 ntBASIC1.72□□□□□ -2.13
CCDC42Q96M95 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.13
CCDC42Q96M95 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
CCDC42Q96M95 UBE2L2-201ENST00000254302 429 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 RNU6-492P-201ENST00000363035 104 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 AC096920.1-201ENST00000423991 241 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC42Q96M95 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC42Q96M95 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC42Q96M95 MTND3P4-201ENST00000453537 303 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC42Q96M95 UBE2DNL-203ENST00000474922 222 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 AC068587.2-201ENST00000478386 781 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC42Q96M95 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC42Q96M95 RNU6-528P-201ENST00000516926 100 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC42Q96M95 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.71□□□□□ -2.14
CCDC42Q96M95 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC42Q96M95 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC42Q96M95 RN7SL622P-201ENST00000585292 275 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 AC106052.1-201ENST00000608029 497 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 MIR8081-201ENST00000611533 95 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 AL603758.1-201ENST00000618654 241 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 AL596245.1-201ENST00000618994 362 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 AC024581.2-201ENST00000619986 252 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.71□□□□□ -2.14
CCDC42Q96M95 MTCO1P4-201ENST00000520516 1409 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 MTCO1P9-201ENST00000505577 1534 ntBASIC1.71□□□□□ -2.14
CCDC42Q96M95 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC42Q96M95 RNU5E-8P-201ENST00000363502 116 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 RNU6-883P-201ENST00000384597 107 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 MIR147B-201ENST00000390185 80 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 USP9YP19-201ENST00000412165 485 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 AL161449.1-201ENST00000414531 1199 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 USP9YP13-201ENST00000417797 480 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC42Q96M95 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.7□□□□□ -2.14
CCDC42Q96M95 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC42Q96M95 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC42Q96M95 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 AL096803.2-201ENST00000450032 677 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC42Q96M95 snoU109.1-201ENST00000459339 135 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 RPS27AP10-201ENST00000496103 208 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC42Q96M95 AC010460.2-201ENST00000509054 677 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 NRON-201ENST00000517270 370 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC42Q96M95 YWHAZP1-201ENST00000556286 722 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 AC012435.1-202ENST00000568772 240 ntBASIC1.7□□□□□ -2.14
CCDC42Q96M95 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms