Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC138Q96M89 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC138Q96M89 RNU6-884P-201ENST00000363889 107 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC138Q96M89 RNU4-46P-201ENST00000410818 138 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 RPS15AP6-201ENST00000420703 385 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 AL158156.1-201ENST00000422509 473 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 RPL7P2-201ENST00000427639 268 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 MTND1P4-201ENST00000435196 415 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 AC104058.1-201ENST00000448028 297 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 AC092798.1-201ENST00000458542 409 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 RNU6-261P-201ENST00000459506 102 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 TRBV1-201ENST00000476502 284 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 EIF4EP3-201ENST00000498782 656 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 AC092436.1-201ENST00000506450 503 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 AC026784.1-201ENST00000507986 352 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 RN7SKP219-201ENST00000516825 296 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 OR5B10P-201ENST00000532869 642 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 AC068135.2-201ENST00000569293 1028 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 AC126118.1-201ENST00000607744 628 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 RMST_8.1-201ENST00000610287 165 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC138Q96M89 AC005344.1-201ENST00000613391 459 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 SNORD39.4-201ENST00000620099 78 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 AC079684.1-201ENST00000621405 437 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 ZNF285B-201ENST00000561698 1767 ntBASIC3.68□□□□□ -1.82
CCDC138Q96M89 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC138Q96M89 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC138Q96M89 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC138Q96M89 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC138Q96M89 PWAR6-201ENST00000552334 4618 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC006020.1-201ENST00000420179 1854 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC138Q96M89 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC138Q96M89 Y_RNA.9-201ENST00000362354 101 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 Y_RNA.255-201ENST00000364581 97 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 SNORA14A-201ENST00000364773 135 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 RNU6-116P-201ENST00000384042 109 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 RNU6-198P-201ENST00000384258 104 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 Y_RNA.554-201ENST00000384672 102 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 RNA5SP424-201ENST00000390988 115 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 RNU6-780P-201ENST00000391030 104 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 RNU6-550P-201ENST00000391057 101 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC063979.1-201ENST00000415539 377 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 HMGN2P30-201ENST00000423237 256 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC138Q96M89 C8orf59P1-201ENST00000429930 303 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC016691.1-201ENST00000441321 413 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC138Q96M89 AL118520.1-201ENST00000450770 291 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 AL031183.1-201ENST00000457667 207 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 RN7SKP83-201ENST00000516512 178 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC138Q96M89 OR5AQ1P-201ENST00000527596 927 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC005951.1-201ENST00000576706 485 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 AP003465.2-201ENST00000602571 373 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC025165.5-201ENST00000602802 578 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC093788.1-201ENST00000609356 927 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC024940.5-201ENST00000622889 474 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC138Q96M89 AC010680.1-201ENST00000590024 3590 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC138Q96M89 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC138Q96M89 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC138Q96M89 AP004289.2-201ENST00000444413 1457 ntBASIC3.67□□□□□ -1.82
CCDC138Q96M89 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC138Q96M89 CKAP2P1-201ENST00000555477 2049 ntBASIC3.66□□□□□ -1.82
CCDC138Q96M89 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC138Q96M89 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC138Q96M89 AL139276.1-201ENST00000311910 1001 ntBASIC3.66□□□□□ -1.82
CCDC138Q96M89 Y_RNA.33-201ENST00000362591 102 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms