Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC007566.2-201ENST00000603642 413 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 BRDTP1-201ENST00000605735 677 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 AC240442.1-201ENST00000616055 283 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 CR381572.2-201ENST00000624852 397 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 AC008873.1-201ENST00000625051 138 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 U8.8-201ENST00000365399 135 ntBASIC5.63□□□□□ -1.51
TRIM47Q96LD4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 Y_RNA.480-201ENST00000384364 102 ntBASIC5.63□□□□□ -1.51
TRIM47Q96LD4 AC016831.4-201ENST00000438302 307 ntBASIC5.63□□□□□ -1.51
TRIM47Q96LD4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 RNU6-1211P-201ENST00000459179 105 ntBASIC5.63□□□□□ -1.51
TRIM47Q96LD4 RPS27AP1-201ENST00000475545 471 ntBASIC5.63□□□□□ -1.51
TRIM47Q96LD4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 NDUFB4P11-201ENST00000560510 395 ntBASIC5.63□□□□□ -1.51
TRIM47Q96LD4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 AC023575.1-201ENST00000580510 358 ntBASIC5.63□□□□□ -1.51
TRIM47Q96LD4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 AL590099.1-201ENST00000615276 138 ntBASIC5.63□□□□□ -1.51
TRIM47Q96LD4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.63□□□□□ -1.51
TRIM47Q96LD4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AL731532.2-201ENST00000623542 1953 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AC093849.1-201ENST00000563631 2209 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 Y_RNA.358-201ENST00000365491 99 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AL022722.2-201ENST00000402519 180 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AC073063.1-201ENST00000434352 607 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 RPL35AP21-201ENST00000437667 333 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 NIP7P2-201ENST00000485801 544 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 ERHP1-201ENST00000523006 310 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 TGIF1P1-201ENST00000558095 802 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AC007224.1-201ENST00000564410 144 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 MIR548X2-201ENST00000579776 100 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AC174048.1-201ENST00000603389 144 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AC011944.2-201ENST00000624440 683 ntBASIC5.62□□□□□ -1.51
TRIM47Q96LD4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM47Q96LD4 AL592148.3-201ENST00000608771 2646 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 SNORA25.1-201ENST00000362326 128 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 SNORA37-201ENST00000384504 129 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 U3.30-201ENST00000391308 210 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 RNA5SP89-201ENST00000410300 108 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 RN7SKP159-201ENST00000410657 292 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AC114755.2-201ENST00000413520 361 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 GNG5P5-201ENST00000420444 220 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 RPL36P19-201ENST00000430744 301 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 RPS5P7-201ENST00000456664 608 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 RN7SL604P-201ENST00000492589 296 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms