Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
MS4A4AQ96JQ5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MS4A4AQ96JQ5 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
MS4A4AQ96JQ5 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 AC092268.1-201ENST00000342691 405 ntBASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 SNORA25.7-201ENST00000364375 127 ntBASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 RNU6-1141P-201ENST00000364520 107 ntBASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 RNU6-915P-201ENST00000364943 103 ntBASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 RPL11P3-201ENST00000395256 523 ntBASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 RN7SKP61-201ENST00000410642 295 ntBASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 ELOCP21-201ENST00000412558 336 ntBASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 RPL34P20-201ENST00000442771 351 ntBASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 AP006289.1-201ENST00000538089 277 ntBASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 LINC00933-203ENST00000559812 219 ntBASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 AL391813.1-201ENST00000603098 260 ntBASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 AC010329.5-201ENST00000623497 2174 ntBASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
MS4A4AQ96JQ5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 RNU6-801P-201ENST00000364087 105 ntBASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 SNORA70H-201ENST00000383910 135 ntBASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 SNORA70J-201ENST00000384182 135 ntBASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 SNORA75.5-201ENST00000391291 81 ntBASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 RNU6-710P-201ENST00000410424 105 ntBASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 AC009963.2-201ENST00000453431 138 ntBASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 MIR3121-201ENST00000579680 77 ntBASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 AC019159.1-201ENST00000605094 187 ntBASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MS4A4AQ96JQ5 OR9K1P-202ENST00000641111 3217 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 Y_RNA.24-201ENST00000362508 103 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 Y_RNA.393-201ENST00000383936 102 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 RNU6-178P-201ENST00000384631 104 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 MIR153-1-201ENST00000384914 90 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 MIR526A2-201ENST00000390198 65 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 U3.40-201ENST00000408706 208 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 AC096649.2-201ENST00000416186 393 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 AC078809.1-201ENST00000427601 140 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 TDGF1P1-201ENST00000445734 527 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 AC073264.2-201ENST00000448886 166 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 HSPE1P13-201ENST00000451143 297 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 KC877373.1-201ENST00000479066 408 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 RNU6-436P-201ENST00000516171 114 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 AC053481.4-201ENST00000583164 216 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 AL773545.4-201ENST00000637262 310 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 AL513478.4-201ENST00000641636 310 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 AC005332.5-201ENST00000591222 2919 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 AL021877.2-201ENST00000624442 10684 ntBASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
MS4A4AQ96JQ5 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms