Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.79□□□□□ -1.96
RFT1Q96AA3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.79□□□□□ -1.96
RFT1Q96AA3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.79□□□□□ -1.96
RFT1Q96AA3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
RFT1Q96AA3 AL359693.1-201ENST00000614959 2407 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RFT1Q96AA3 Z83843.1-201ENST00000604070 3685 ntBASIC2.79□□□□□ -1.96
RFT1Q96AA3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.79□□□□□ -1.96
RFT1Q96AA3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.78□□□□□ -1.96
RFT1Q96AA3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RFT1Q96AA3 Y_RNA.245-201ENST00000364493 95 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 RNU6-1215P-201ENST00000384441 102 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 RNU6-14P-201ENST00000384630 106 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 RNU6-817P-201ENST00000391083 104 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 MIR888-201ENST00000401186 77 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 AL078595.1-201ENST00000404458 226 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 RN7SKP220-201ENST00000410611 288 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 RNA5SP229-201ENST00000410809 99 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.78□□□□□ -1.96
RFT1Q96AA3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.78□□□□□ -1.96
RFT1Q96AA3 AC069157.1-201ENST00000421749 137 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 HMGN2P30-201ENST00000423237 256 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 MTCO3P30-201ENST00000426425 670 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.78□□□□□ -1.96
RFT1Q96AA3 HMGN2P31-201ENST00000432430 273 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 DDX3P2-201ENST00000446138 111 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 RPL23AP20-201ENST00000447965 421 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 RN7SL601P-201ENST00000471221 293 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 AP004217.1-201ENST00000480579 346 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.78□□□□□ -1.96
RFT1Q96AA3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.78□□□□□ -1.96
RFT1Q96AA3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
RFT1Q96AA3 RNA5SP471-201ENST00000516971 106 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 RNA5SP337-201ENST00000517007 109 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 AP000873.5-201ENST00000533906 236 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.78□□□□□ -1.96
RFT1Q96AA3 RPL21P5-201ENST00000554662 472 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 EIF1P4-201ENST00000572664 335 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 AC009977.1-201ENST00000586015 570 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 AC007619.2-201ENST00000605743 379 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 AC091304.9-201ENST00000612091 226 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 AL161629.2-201ENST00000615347 275 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 AC015540.1-201ENST00000615828 501 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 AL731566.2-201ENST00000618971 317 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 FRG1KP-201ENST00000623592 341 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 AC025048.6-202ENST00000627667 438 ntBASIC2.78□□□□□ -1.96
RFT1Q96AA3 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.78□□□□□ -1.96
RFT1Q96AA3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC093536.2-201ENST00000565257 1406 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 FGF7P2-201ENST00000332473 296 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 HSPE1P11-201ENST00000339579 310 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 RNU5E-6P-201ENST00000365574 115 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 RNU1-109P-201ENST00000383960 147 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 RNY3P10-201ENST00000384764 102 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RFT1Q96AA3 RN7SKP111-201ENST00000410349 271 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 RNU2-66P-201ENST00000410650 161 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC063979.1-201ENST00000415539 377 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 RPS15AP12-201ENST00000419498 388 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.77□□□□□ -1.97
RFT1Q96AA3 ISCA1P1-201ENST00000426679 387 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC091286.1-201ENST00000431233 461 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.77□□□□□ -1.97
RFT1Q96AA3 RPS24P13-201ENST00000442520 397 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AL022238.1-201ENST00000442557 355 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.77□□□□□ -1.97
RFT1Q96AA3 FABP5P15-201ENST00000453566 214 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.77□□□□□ -1.97
RFT1Q96AA3 SRRM1P2-201ENST00000464531 1192 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC010587.1-201ENST00000505809 469 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.77□□□□□ -1.97
RFT1Q96AA3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.77□□□□□ -1.97
RFT1Q96AA3 Y_RNA.672-201ENST00000516289 104 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 RNU2-10P-201ENST00000516375 211 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC026403.1-201ENST00000518938 295 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC134698.4-201ENST00000523451 826 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC007458.1-201ENST00000542812 373 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.77□□□□□ -1.97
RFT1Q96AA3 CKS1BP3-201ENST00000600888 237 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC098614.4-201ENST00000607601 462 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC107294.1-201ENST00000609524 467 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC069234.5-201ENST00000611056 416 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC008498.1-201ENST00000613012 531 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC004852.3-201ENST00000614131 326 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AL157817.1-201ENST00000614264 790 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 AL359740.1-201ENST00000624340 592 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.77□□□□□ -1.97
RFT1Q96AA3 AC012442.3-202ENST00000636742 206 ntBASIC2.77□□□□□ -1.97
RFT1Q96AA3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RFT1Q96AA3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RFT1Q96AA3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
RFT1Q96AA3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RFT1Q96AA3 AC027514.1-201ENST00000588561 1603 ntBASIC2.76□□□□□ -1.97
RFT1Q96AA3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms